Cagra.1504s0045 (Capsella grandiflora)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cagra.1504s0045 T007734_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.788 0.980
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.788 0.980
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.685 0.857
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1504s0045.1.p AP2 77 128

Links

Other AP2 family TFs
Other Capsella grandiflora TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1998_YCR018C Saccharomyces mikatae 1998_YCR018C I
24940_YPL021W Saccharomyces bayanus 24940_YPL021W I
2668_Multiple Saccharomyces bayanus 2668_Multiple I
SKUD_204801 Saccharomyces kudriavzevii SKUD_204801 I
SU7_0367 Saccharomyces arboricola SU7_0367 I
SRD1 Saccharomyces cerevisiae YCR018C D