Eucgr.F01607 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.F01607 T008160_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.726 0.878
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.726 0.878
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.726 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F01607.1 AP2 36 87

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G62085 Arabidopsis thaliana AT1G62085 N
Bostr.22157s0123 Boechera stricta Bostr.22157s0123 I
Bostr.22157s0134 Boechera stricta Bostr.22157s0134 N
Bostr.22157s0159 Boechera stricta Bostr.22157s0159 N
Cagra.0043s0026 Capsella grandiflora Cagra.0043s0026 N
Carubv10020262m.g Capsella rubella Carubv10020262m.g N
Carubv10020263m.g Capsella rubella Carubv10020263m.g N
scaffold_200344.1 Arabidopsis lyrata scaffold_200344.1 N