Gorai.001G042300 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.001G042300 T008464_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.803 0.922
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.748 0.824
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.748 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G042300.1 AP2 5 56

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

299 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_1AS_C7D489C03 Triticum aestivum Traes_1AS_C7D489C03 N
Traes_1BL_9BF41B805 Triticum aestivum Traes_1BL_9BF41B805 N
Traes_1BS_649624FE9 Triticum aestivum Traes_1BS_649624FE9 N
Traes_1BS_FBCD9C4B1 Triticum aestivum Traes_1BS_FBCD9C4B1 N
Traes_1DL_58BEEDC49 Triticum aestivum Traes_1DL_58BEEDC49 N
Traes_1DL_C0569EACC Triticum aestivum Traes_1DL_C0569EACC N
Traes_1DS_E5423261A Triticum aestivum Traes_1DS_E5423261A N
Traes_2AL_0220C7C41 Triticum aestivum Traes_2AL_0220C7C41 N
Traes_2AS_12294E9D5 Triticum aestivum Traes_2AS_12294E9D5 N
Traes_2AS_16D1CC46E Triticum aestivum Traes_2AS_16D1CC46E N
Traes_2AS_5B8CF4BA2 Triticum aestivum Traes_2AS_5B8CF4BA2 N
Traes_2BL_1506D0FD2 Triticum aestivum Traes_2BL_1506D0FD2 N
Traes_2DL_7DFB74CDE Triticum aestivum Traes_2DL_7DFB74CDE N
Traes_2DL_F37E51175 Triticum aestivum Traes_2DL_F37E51175 N
Traes_3AS_465421436 Triticum aestivum Traes_3AS_465421436 N
Traes_3AS_9B4FF6282 Triticum aestivum Traes_3AS_9B4FF6282 N
Traes_3DL_3ECFD7555 Triticum aestivum Traes_3DL_3ECFD7555 N
Traes_3DL_7B0E46392 Triticum aestivum Traes_3DL_7B0E46392 N
Traes_3DS_2D5A1C423 Triticum aestivum Traes_3DS_2D5A1C423 N
Traes_3DS_AB726A97D Triticum aestivum Traes_3DS_AB726A97D N
Traes_4AL_9018B5132 Triticum aestivum Traes_4AL_9018B5132 N
Traes_4AS_551523088 Triticum aestivum Traes_4AS_551523088 N
Traes_4AS_AA492B6A9 Triticum aestivum Traes_4AS_AA492B6A9 N
Traes_4BL_00160D0BD Triticum aestivum Traes_4BL_00160D0BD N
Traes_4BL_0437CF0AD Triticum aestivum Traes_4BL_0437CF0AD N
Traes_4BL_0437CF0AD1 Triticum aestivum Traes_4BL_0437CF0AD1 N
Traes_5AL_69C653611 Triticum aestivum Traes_5AL_69C653611 N
Traes_5AL_9775A72F6 Triticum aestivum Traes_5AL_9775A72F6 N
Traes_5BL_FC8AB1380 Triticum aestivum Traes_5BL_FC8AB1380 N
Traes_5BS_48110DBF6 Triticum aestivum Traes_5BS_48110DBF6 N
Traes_6AL_B082ABBFC Triticum aestivum Traes_6AL_B082ABBFC N
Traes_6AL_F23B20CBD Triticum aestivum Traes_6AL_F23B20CBD N
Traes_6AS_6D2F550E3 Triticum aestivum Traes_6AS_6D2F550E3 N
Traes_6AS_895EC9E40 Triticum aestivum Traes_6AS_895EC9E40 N
Traes_6BL_7BF2DD21E Triticum aestivum Traes_6BL_7BF2DD21E N
Traes_6BS_0A7B95279 Triticum aestivum Traes_6BS_0A7B95279 N
Traes_6DL_E5423261A Triticum aestivum Traes_6DL_E5423261A N
Traes_6DL_E5423261A1 Triticum aestivum Traes_6DL_E5423261A1 N
Traes_6DS_10411A1DC Triticum aestivum Traes_6DS_10411A1DC N
Traes_6DS_2BF4B191B Triticum aestivum Traes_6DS_2BF4B191B N
Traes_6DS_31C9B430A Triticum aestivum Traes_6DS_31C9B430A N
Traes_6DS_31C9B430A1 Triticum aestivum Traes_6DS_31C9B430A1 N
Traes_6DS_6A0696911 Triticum aestivum Traes_6DS_6A0696911 N
Traes_6DS_D1DD7A4C2 Triticum aestivum Traes_6DS_D1DD7A4C2 N
Traes_7AL_5585F9BD1 Triticum aestivum Traes_7AL_5585F9BD1 N
Traes_7AS_0437CF0AD Triticum aestivum Traes_7AS_0437CF0AD N
Traes_7AS_6EE1182D4 Triticum aestivum Traes_7AS_6EE1182D4 N
Traes_7AS_6EE1182D41 Triticum aestivum Traes_7AS_6EE1182D41 N
Traes_7AS_6EE1182D42 Triticum aestivum Traes_7AS_6EE1182D42 N
Traes_7BL_65B9384BF Triticum aestivum Traes_7BL_65B9384BF N
Traes_7BL_9884A6FA5 Triticum aestivum Traes_7BL_9884A6FA5 N
Traes_7DL_E5423261A Triticum aestivum Traes_7DL_E5423261A N
Traes_7DL_E5423261A1 Triticum aestivum Traes_7DL_E5423261A1 N
Traes_7DL_E5423261A2 Triticum aestivum Traes_7DL_E5423261A2 N
Traes_7DS_6354FF359 Triticum aestivum Traes_7DS_6354FF359 N