CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10031652.g
(
Linum usitatissimum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Lus10031652.g
T008879_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10031652
AP2
21
71
SRYKGVRIRSGKWVSEIREPKKTTRIWLGTYPTPEMAAAAYDVAAIALKGP
Links
Other
AP2
family TFs
Other
Linum usitatissimum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_03877
Capronia coronata
A1O1_03877
I
A1O3_06500
Capronia epimyces
A1O3_06500
I
A1O5_07338
Cladophialophora psammophila
A1O5_07338
N
A1O7_09828
Cladophialophora yegresii
A1O7_09828
N
A1O9_11755
Exophiala aquamarina
A1O9_11755
N
estExt_Genewise1Plus.C_sca_31_chr3_5_00235
Nectria haematococca
estExt_Genewise1Plus.C_sca_31_chr3_5_00235
N
FFUJ_10935
Fusarium fujikuroi
FFUJ_10935
N
FGRRES_03246
Fusarium graminearum
FGRRES_03246
N
FOXG_09999
Fusarium oxysporum
FOXG_09999
N
FVEG_08515
Fusarium verticillioides
FVEG_08515
N
G647_08456
Cladophialophora carrionii
G647_08456
N
HMPREF1120_08967
Exophiala dermatitidis
HMPREF1120_08967
I
HMPREF1541_03984
Cyphellophora europaea
HMPREF1541_03984
I
NechaG67867
Fusarium solani
NechaG67867
N
PV04_10883
Capronia semiimmersa
PV04_10883
N
PV05_03690
Exophiala xenobiotica
PV05_03690
I
PV06_07241
Exophiala oligosperma
PV06_07241
I
PV07_08392
Cladophialophora immunda
PV07_08392
N
PV08_06607
Exophiala spinifera
PV08_06607
I
PV10_06264
Exophiala mesophila
PV10_06264
I
PV11_05624
Exophiala sideris
PV11_05624
N
Z518_07460
Rhinocladiella mackenziei
Z518_07460
I
Z519_05910
Cladophialophora bantiana
Z519_05910
N