Pavir.J22169 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.J22169 T009599_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.702 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J22169.1.p AP2 72 123

Links

Other AP2 family TFs
Other Panicum virgatum TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_001610 Acremonium chrysogenum ACRE_001610 N
CHGG_02890 Chaetomium globosum CHGG_02890 I
CPUR_04923 Claviceps purpurea CPUR_04923 N
CTHT_0024110 Chaetomium thermophilum CTHT_0024110 I
FFUJ_03219 Fusarium fujikuroi FFUJ_03219 N
FGRRES_07243 Fusarium graminearum FGRRES_07243 N
FOXG_02174 Fusarium oxysporum FOXG_02174 N
FPSE_00192 Fusarium pseudograminearum FPSE_00192 N
FVEG_05341 Fusarium verticillioides FVEG_05341 N
GGTG_08149 Gaeumannomyces graminis GGTG_08149 I
gw1.3.1452.1 Nectria haematococca gw1.3.1452.1 N
MAC_08651 Metarhizium acridum MAC_08651 N
MAJ_01159 Metarhizium majus MAJ_01159 N
MAM_02403 Metarhizium album MAM_02403 N
MANI_008576 Metarhizium anisopliae MANI_008576 N
MAPG_07954 Magnaporthe poae MAPG_07954 I
MBR_01178 Metarhizium brunneum MBR_01178 N
MGU_01854 Metarhizium guizhouense MGU_01854 N
MYCTH_2304200 Myceliophthora thermophila MYCTH_2304200 I
NechaG23657 Fusarium solani NechaG23657 N
OCS_02929 Ophiocordyceps sinensis OCS_02929 N
S40285_01213 Stachybotrys chlorohalonata S40285_01213 N
S40288_05241 Stachybotrys chartarum S40288_05241 N
THITE_2119520 Thielavia terrestris THITE_2119520 I
TRIATDRAFT_164783 Trichoderma atroviride TRIATDRAFT_164783 N
TRIREDRAFT_57756 Trichoderma reesei TRIREDRAFT_57756 N
TRIVIDRAFT_12894 Trichoderma virens TRIVIDRAFT_12894 N
UV8b_7435 Ustilaginoidea virens UV8b_7435 N
X797_001665 Metarhizium robertsii X797_001665 N