CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J34903
(
Panicum virgatum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Pavir.J34903
T009642_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J34903.1.p
AP2
80
141
SVYRGVTRHRWTGRFEAHLWDKHCLTSLQNKKKGRQVYLGAYDTEEAAARAYDLAALKYWGP
Pavir.J34903.1.p
AP2
183
217
SKYRGVARHHHNGRWEARIGRVFGNKYLYLGTFGM
Links
Other
AP2
family TFs
Other
Panicum virgatum
TFs
260 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CNH02820
Cryptococcus neoformans
CNH02820
N
gw1.6.60.1
Tremella mesenterica
gw1.6.60.1
N