CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

SapurV1A.0237s0040 *(Salix purpurea)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00847 (AP2)	IPR001471	SapurV1A.0237s0040	T009741_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
CRF2 M01622_2.00	Arabidopsis thaliana	SCGCCGCC	GGCGGCGS	PBM Weirauch et al.(2014) pTH8680	0.789	0.898
LOC_Os08g36920 M01634_2.00	Oryza sativa	NNNGSCGHNN	NNDCGSCNNN	PBM Weirauch et al.(2014) pTH8596	0.772	0.776
CRF3 M01633_2.00	Arabidopsis thaliana	NNGCCRNNN	NNNYGGCNN	PBM Weirauch et al.(2014) pTH8110	0.769	0.816
O65242_TOBAC M09730_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TSI1_01	0.758	0.796
CRF4 M01626_2.00	Arabidopsis thaliana	SCGCCGCC	GGCGGCGS	PBM Weirauch et al.(2014) pTH8261	0.756	0.796
CRF4 M06645_2.00	Arabidopsis thaliana	BMDCCGCCGCCRCHDHHDCYN	NRGHDDHDGYGGCGGCGGHKV	Dap-seq OMalley et al.(2016) CRF4_col_a	0.756	0.796
CRF4 M06646_2.00	Arabidopsis thaliana	YCDYCGCCGCCGYYD	HRRCGGCGGCGRHGR	Dap-seq OMalley et al.(2016) CRF4_colamp_a	0.756	0.796
ERF069 M01604_2.00	Arabidopsis thaliana	NNGCCGNNN	NNNCGGCNN	PBM Weirauch et al.(2014) pTH7550	0.735	0.796
AT2G33710 M01613_2.00	Arabidopsis thaliana	NSMGCCGHMN	NKDCGGCKSN	PBM Weirauch et al.(2014) pTH7543	0.735	0.694
AT2G33710 M06606_2.00	Arabidopsis thaliana	DBCGCCGCCGYHDHHDNH	DNHDDHDRCGGCGGCGVH	Dap-seq OMalley et al.(2016) At2g33710_colamp_a	0.735	0.694
AT2G33710 M06607_2.00	Arabidopsis thaliana	NHDYCKCCGCCGYMD	HKRCGGCGGMGRHDN	Dap-seq OMalley et al.(2016) At2g33710_col	0.735	0.694
ERF113 M01629_2.00	Arabidopsis thaliana	NNGCCGHHNN	NNDDCGGCNN	PBM Weirauch et al.(2014) pTH8097	0.725	0.653
ERF5 M00721_2.00	Arabidopsis thaliana	NNNGSMRNMN	NKNYKSCNNN	PBM Chang et al.(2013) pTH7197	0.721	0.694
ERF5 M06674_2.00	Arabidopsis thaliana	YCDYCKCCGCCGYCD	HGRCGGCGGMGRHGR	Dap-seq OMalley et al.(2016) ERF5_col_a	0.721	0.694
ERF5 M06675_2.00	Arabidopsis thaliana	NHDBCGCCGCCRYHDNHDNNN	NNNHDNHDRYGGCGGCGVHDN	Dap-seq OMalley et al.(2016) ERF5_colamp_a	0.721	0.694
ERF5_TOBAC M09729_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF4_02	0.720	0.694
ERF091 M06638_2.00	Arabidopsis thaliana	NNHNYHDCCGCCGCCRY	RYGGCGGCGGHDRNDNN	Dap-seq OMalley et al.(2016) AT4G18450_col_a	0.718	0.694
RAP2-2 M00719_2.00	Arabidopsis thaliana	NNRBYGNN	NNCRVYNN	PBM Chang et al.(2013) pTH7227	0.716	0.694
ERF2_TOBAC M09727_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF2_01	0.713	0.673
A4F249_TOBAC M09726_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRAF2_01	0.712	0.755
Q7Y1W2_TOBAC M09735_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$CEF1_01	0.708	0.673
ERF104 M06682_2.00	Arabidopsis thaliana	NNHHDYMDCCGCCGCCRYH	DRYGGCGGCGGHKRHDDNN	Dap-seq OMalley et al.(2016) ERF104_col_a	0.705	0.673
ERF104 M06683_2.00	Arabidopsis thaliana	BHDSCGCCGCCRYHD	HDRYGGCGGCGSHDV	Dap-seq OMalley et al.(2016) ERF104_colamp_a	0.705	0.673
ERF105 M01632_2.00	Arabidopsis thaliana	CGCCGGCM	KGCCGGCG	PBM Weirauch et al.(2014) pTH7233	0.703	0.673
ERF105 M06676_2.00	Arabidopsis thaliana	NHNNNNNNNNHNNHDBCGCCGCCR	YGGCGGCGVHDNNDNNNNNNNNDN	Dap-seq OMalley et al.(2016) ERF105_colamp_a	0.703	0.673
ERF105 M06677_2.00	Arabidopsis thaliana	HDSCGCCGCCRYHDH	DHDRYGGCGGCGSHD	Dap-seq OMalley et al.(2016) ERF105_col	0.703	0.673
PK02330.1 M01095_2.00	Cannabis sativa	NNNGCCGBCN	NGVCGGCNNN	PBM Lambert et al.(2019) pTH10093	0.703	0.673
ERF096 M01630_2.00	Arabidopsis thaliana	NVGCCGNCNN	NNGNCGGCBN	PBM Weirauch et al.(2014) pTH7909	0.702	0.673
A4F248_TOBAC M09725_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRAF1_01	0.697	0.714
ERF4 M01616_2.00	Arabidopsis thaliana	VCGCCGCC	GGCGGCGB	PBM Weirauch et al.(2014) pTH8156	0.696	0.653
ERF4 M06616_2.00	Arabidopsis thaliana	YCDCCGCCGCCRHHD	HDDYGGCGGCGGHGR	Dap-seq OMalley et al.(2016) ERF4_col_a	0.696	0.653
ERF4 M06617_2.00	Arabidopsis thaliana	NHNNHNSCGCCGYCRHHDNN	NNHDDYGRCGGCGSNDNNDN	Dap-seq OMalley et al.(2016) ERF4_colamp_a	0.696	0.653
EREBP1 M09708_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$EREBP1_01	0.696	0.673
PK19363.1 M01100_2.00	Cannabis sativa	NMGCCGHMNN	NNKDCGGCKN	PBM Lambert et al.(2019) pTH10138	0.691	0.653
PK19363.1 M01643_2.00	Cannabis sativa	CGCCGYCD	HGRCGGCG	PBM Weirauch et al.(2014) pTH9609	0.691	0.653
ERF9 M06670_2.00	Arabidopsis thaliana	YCDCCGCCGYCDHHDYHDYHN	NDRHDRHDDHGRCGGCGGHGR	Dap-seq OMalley et al.(2016) ERF9_col_a	0.689	0.653
ERF9 M06671_2.00	Arabidopsis thaliana	NNHDSCGCCGYCRHWDN	NHWDYGRCGGCGSHDNN	Dap-seq OMalley et al.(2016) ERF9_colamp_a	0.689	0.653
Q84J59_MAIZE M09717_2.00	Zea mays	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$BD1_01	0.688	0.612
RAP2-12 M01046_2.00	Arabidopsis thaliana	RSMGBMNNNN	NNNNKVCKSY	PBM Sullivan et al.(2014) pTH7359	0.688	0.653
RAP2-12 M06588_2.00	Arabidopsis thaliana	NHDCCGCCGCCRHHDHNNNHN	NDNNNDHDDYGGCGGCGGHDN	Dap-seq OMalley et al.(2016) RAP212_col_a	0.688	0.653
RAP2-3 M01050_2.00	Arabidopsis thaliana	CGCCGCCR	YGGCGGCG	PBM Sullivan et al.(2014) pTH8811	0.687	0.714
RAP2-3 M00847_2.00	Arabidopsis thaliana	NMGCCGCCDN	NHGGCGGCKN	PBM Franco-Zorrilla et al.(2014) RAP2.3	0.687	0.714
Q5Y836_TOBAC M09732_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF5_02	0.687	0.653
ERF10 M06562_2.00	Arabidopsis thaliana	NNHNNHNHHDYCGCCGCCRYN	NRYGGCGGCGRHDDNDNNDNN	Dap-seq OMalley et al.(2016) ERF10_col_a	0.684	0.612
ERF10 M06563_2.00	Arabidopsis thaliana	HDSCGCCGCCRHHDNNNNNN	NNNNNNHDDYGGCGGCGSHD	Dap-seq OMalley et al.(2016) ERF10_colamp_a	0.684	0.612
ERF4_TOBAC M09728_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF3_02	0.683	0.633
0100010458 M01644_2.00	Ostreococcus tauri	MGCCGSCR	YGSCGGCK	PBM Weirauch et al.(2014) pTH9447	0.682	0.694
ERF1A M00848_2.00	Arabidopsis thaliana	NNNNRNN	NNYNNNN	PBM Franco-Zorrilla et al.(2014) ATERF1	0.682	0.653
ERF1A M00720_2.00	Arabidopsis thaliana	NMGCCRNCN	NGNYGGCKN	PBM Chang et al.(2013) pTH7202	0.682	0.653
ERF086 M06663_2.00	Arabidopsis thaliana	HHDYCKCCGCCGYHD	HDRCGGCGGMGRHDD	Dap-seq OMalley et al.(2016) PUCHI_col_a	0.680	0.612
ERF086 M06664_2.00	Arabidopsis thaliana	NNNNHDHCKCCGCCGYHDHHDHNNN	NNNDHDDHDRCGGCGGMGDHDNNNN	Dap-seq OMalley et al.(2016) PUCHI_colamp_a	0.680	0.612
ERF1B M01619_2.00	Arabidopsis thaliana	NMGCCGCCRN	NYGGCGGCKN	PBM Weirauch et al.(2014) pTH8795	0.678	0.633
ERF1B M06626_2.00	Arabidopsis thaliana	NHNNHDYMGCCGCCRYHDNHDNNNNNNN	NNNNNNNHDNHDRYGGCGGCKRHDNNDN	Dap-seq OMalley et al.(2016) ERF1_col_a	0.678	0.633
ERF1B M06627_2.00	Arabidopsis thaliana	MGCCGCCD	HGGCGGCK	Dap-seq OMalley et al.(2016) ERF1_colamp_a	0.678	0.633
ERF1B M09703_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF1_Q2_01	0.678	0.633
ERF1B M09704_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF1_Q2	0.678	0.633
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
SapurV1A.0237s0040.1.p	AP2	127	178	KKFRGVRQRPWGKWAAEIRDPLRRVRLWLGTYDTAEEAAMVYDNAAIQLRGA

Links
Other AP2 family TFs
Other *Salix purpurea* TFs

1719 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ACRE_050290	Acremonium chrysogenum	ACRE_050290	I
A_00735	Schistosoma haematobium	A_00735	I
BBA_08340	Beauveria bassiana	BBA_08340	I
BGHDH14_bgh04622	Blumeria graminis	BGHDH14_bgh04622	I
CCM_05801	Cordyceps militaris	CCM_05801	I
CFIO01_11202	Colletotrichum fioriniae	CFIO01_11202	I
CGGC5_11787	Colletotrichum gloeosporioides	CGGC5_11787	I
CH063_03691	Colletotrichum higginsianum	CH063_03691	I
CHGG_03006	Chaetomium globosum	CHGG_03006	I
Cob_05805	Colletotrichum orbiculare	Cob_05805	I
CPUR_06147	Claviceps purpurea	CPUR_06147	I
CSUB01_11183	Colletotrichum sublineola	CSUB01_11183	I
CTHT_0027300	Chaetomium thermophilum	CTHT_0027300	I
foxk2	Danio rerio	ENSDARG00000030583	I
foxk2	Gasterosteus aculeatus	ENSGACG00000014443	I
FOXK2	Gasterosteus aculeatus	ENSGACG00000015190	I
ENSGMOG00000001605	Gadus morhua	ENSGMOG00000001605	I
ENSGMOG00000002370	Gadus morhua	ENSGMOG00000002370	I
ENSONIG00000003229	Oreochromis niloticus	ENSONIG00000003229	I
ENSONIG00000009564	Oreochromis niloticus	ENSONIG00000009564	I
ENSONIG00000019520	Oreochromis niloticus	ENSONIG00000019520	I
foxk2	Oryzias latipes	ENSORLG00000000973	I
ENSORLG00000012992	Oryzias latipes	ENSORLG00000012992	I
ENSPFOG00000004194	Poecilia formosa	ENSPFOG00000004194	I
ENSPFOG00000019094	Poecilia formosa	ENSPFOG00000019094	I
FOXK2	Tetraodon nigroviridis	ENSTNIG00000010237	I
foxk2	Tetraodon nigroviridis	ENSTNIG00000011273	I
foxk2	Takifugu rubripes	ENSTRUG00000002114	I
FOXK2	Takifugu rubripes	ENSTRUG00000003203	I
ENSXMAG00000011644	Xiphophorus maculatus	ENSXMAG00000011644	I
estExt_fgenesh1_pg.C_10757	Cryphonectria parasitica	estExt_fgenesh1_pg.C_10757	I
estExt_fgenesh1_pm.C_sca_10_chr8_2_00283	Nectria haematococca	estExt_fgenesh1_pm.C_sca_10_chr8_2_00283	I
estExt_fgenesh3_pm.C_50535	Neurospora discreta	estExt_fgenesh3_pm.C_50535	I
EV44_g2043	Erysiphe necator	EV44_g2043	I
F503_05269	Ophiostoma piceae uamh	F503_05269	I
fd68A	Drosophila melanogaster	FBgn0036134	I
GG13935	Drosophila erecta	FBgn0106198	I
GH14639	Drosophila grimshawi	FBgn0122115	I
GI11623	Drosophila mojavensis	FBgn0134383	I
GL22763	Drosophila persimilis	FBgn0160354	I
GK20555	Drosophila willistoni	FBgn0222552	I
GE20234	Drosophila yakuba	FBgn0237554	I
FFUJ_08512	Fusarium fujikuroi	FFUJ_08512	I
FGRRES_05388	Fusarium graminearum	FGRRES_05388	I
FOXG_09518	Fusarium oxysporum	FOXG_09518	I
FPSE_09301	Fusarium pseudograminearum	FPSE_09301	I
FVEG_07145	Fusarium verticillioides	FVEG_07145	I
GB52677	Apis mellifera	GB52677	I
GGTG_09531	Gaeumannomyces graminis	GGTG_09531	I
GLRG_08404	Colletotrichum graminicola	GLRG_08404	I
HelroG74778	Helobdella robusta	HelroG74778	I
HMPREF1624_03038	Sporothrix schenckii	HMPREF1624_03038	I
ISCW002976	Ixodes scapularis	ISCW002976	I
L798_01624	Zootermopsis nevadensis	L798_01624	I
LCUP004460	Lucilia cuprina	LCUP004460	I
LOAG_18033	Loa loa	LOAG_18033	I
LotgiG106315	Lottia gigantea	LotgiG106315	I
M7I_6126	Glarea lozoyensis	M7I_6126	I
MAC_06478	Metarhizium acridum	MAC_06478	I
MAJ_03634	Metarhizium majus	MAJ_03634	I
MAM_01651	Metarhizium album	MAM_01651	I
MANI_018274	Metarhizium anisopliae	MANI_018274	I
MAPG_02573	Magnaporthe poae	MAPG_02573	I
MBR_07520	Metarhizium brunneum	MBR_07520	I
MDOA009504	Musca domestica	MDOA009504	I
MGG_06258	Magnaporthe oryzae	MGG_06258	I
MGU_03813	Metarhizium guizhouense	MGU_03813	I
MYCTH_2304475	Myceliophthora thermophila	MYCTH_2304475	I
NCU00019	Neurospora crassa	NCU00019	D
nDi.2.2.2.g09096	Dirofilaria immitis	nDi.2.2.2.g09096	I
nDi.2.2.2.g09529	Dirofilaria immitis	nDi.2.2.2.g09529	I
NechaG105094	Fusarium solani	NechaG105094	I
NEUTE1DRAFT_129588	Neurospora tetrasperma	NEUTE1DRAFT_129588	I
nLs.2.1.2.g01892	Litomosoides sigmodontis	nLs.2.1.2.g01892	I
nOo.2.0.1.g03356	Onchocerca ochengi	nOo.2.0.1.g03356	I
OCS_06320	Ophiocordyceps sinensis	OCS_06320	I
OIDMADRAFT_176187	Oidiodendron maius	OIDMADRAFT_176187	I
PFICI_05264	Pestalotiopsis fici	PFICI_05264	I
PODANS_7_5690	Podospora anserina	PODANS_7_5690	I
S40285_00418	Stachybotrys chlorohalonata	S40285_00418	I
S40288_00189	Stachybotrys chartarum	S40288_00189	I
SAPIO_CDS5401	Scedosporium apiospermum	SAPIO_CDS5401	I
SCUD_0002144401	Schistosoma curassoni	SCUD_0002144401	I
SMAC_00110	Sordaria macrospora	SMAC_00110	I
Smp_145650	Schistosoma mansoni	Smp_145650	I
SMRZ_0002168001	Schistosoma margrebowiei	SMRZ_0002168001	I
SMTD_0000908801	Schistosoma mattheei	SMTD_0000908801	I
SPBR_01352	Sporothrix brasiliensis	SPBR_01352	I
SPU_025010	Strongylocentrotus purpuratus	SPU_025010	D
SROB_0001634001	Schistosoma rodhaini	SROB_0001634001	I
tetur27g00040	Tetranychus urticae	tetur27g00040	I
THITE_2119283	Thielavia terrestris	THITE_2119283	I
TriadG21017	Trichoplax adhaerens	TriadG21017	I
TRIATDRAFT_145960	Trichoderma atroviride	TRIATDRAFT_145960	I
TRIREDRAFT_70517	Trichoderma reesei	TRIREDRAFT_70517	I
TRIVIDRAFT_51092	Trichoderma virens	TRIVIDRAFT_51092	I
UCREL1_2890	Eutypa lata	UCREL1_2890	I
UV8b_1686	Ustilaginoidea virens	UV8b_1686	I
VDAG_06619	Verticillium dahliae	VDAG_06619	I
VHEMI01479	Torrubiella hemipterigena	VHEMI01479	I
X797_003372	Metarhizium robertsii	X797_003372	I
XP_002157478.1	Hydra magnipapillata	XP_002157478.1	I

SapurV1A.0237s0040 (Salix purpurea) AP2

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1719 Related TFs

SapurV1A.0237s0040 **(Salix purpurea)
AP2**