LjSGA_019003.1 (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 LjSGA_019003.1 T010277_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SHN2
M06660_2.00 		Arabidopsis thaliana
DCCDCCRCCDCCDCCRCCRCY
RGYGGYGGHGGHGGYGGHGGH		 Dap-seq
OMalley et al.(2016)
SHN3_col_a 		0.786 0.961
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_019003.1 AP2 5 56

Links

Other AP2 family TFs
Other Lotus japonicus TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000000496 Ailuropoda melanoleuca ENSAMEG00000000496 N
THAP2 Bos taurus ENSBTAG00000012271 N
ENSBTAP00000016276-D2 Bos grunniens ENSBTAP00000016276-D2 N
THAP2 Canis familiaris ENSCAFG00000000456 N
THAP2 Callithrix jacchus ENSCJAG00000001382 N
THAP2 Cavia porcellus ENSCPOG00000009524 N
ENSCSAG00000004092 Chlorocebus sabaeus ENSCSAG00000004092 N
ENSDNOG00000049696 Dasypus novemcinctus ENSDNOG00000049696 N
Thap2 Dipodomys ordii ENSDORG00000006270 N
THAP2 Homo sapiens ENSG00000173451 N
THAP2 Gorilla gorilla ENSGGOG00000015483 N
ENSLACG00000005196 Latimeria chalumnae ENSLACG00000005196 N
ENSMEUG00000015495 Macropus eugenii ENSMEUG00000015495 N
THAP2 Myotis lucifugus ENSMLUG00000004164 N
ENSMMUG00000020946 Macaca mulatta ENSMMUG00000020946 N
ENSMMUP00000027563 Macaca fascicularis ENSMMUP00000027563 N
ENSMPUG00000017487 Mustela putorius furo ENSMPUG00000017487 N
ENSMPUG00000019081 Mustela putorius furo ENSMPUG00000019081 N
Thap2 Mus musculus ENSMUSG00000020137 N
ENSNLEG00000004398 Nomascus leucogenys ENSNLEG00000004398 N
ENSOARG00000014616 Ovis aries ENSOARG00000014616 N
THAP2 Oryctolagus cuniculus ENSOCUG00000013308 N
THAP2 Ochotona princeps ENSOPRG00000013944 N
THAP2 Procavia capensis ENSPCAG00000003970 N
ENSPPYG00000004774 Pongo abelii ENSPPYG00000004774 N
ENSPSIG00000012990 Pelodiscus sinensis ENSPSIG00000012990 N
THAP2 Pan troglodytes ENSPTRG00000005225 N
THAP2 Pteropus vampyrus ENSPVAG00000012359 N
Thap2 Rattus norvegicus ENSRNOG00000003993 N
THAP2 Sorex araneus ENSSARG00000010362 N
THAP2 Sus scrofa ENSSSCG00000021270 N
ENSSTOG00000002694 Ictidomys tridecemlineatus ENSSTOG00000002694 N
THAP2 Tupaia belangeri ENSTBEG00000016924 N
ENSTSYG00000005486 Tarsius syrichta ENSTSYG00000005486 N
THAP2 Tursiops truncatus ENSTTRG00000007330 N
THAP2 Vicugna pacos ENSVPAG00000010909 N