CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold406-EXSNAP2012.18
(
Pristionchus exspectatus
)
AP-2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03299 (TF_AP-2)
IPR013854
scaffold406-EXSNAP2012.18
T011534_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold406-EXSNAP2012.18
AP-2
1
153
MGLLADQLKVHHITLDAGRRKSAKNTTFTAMLEVNMTTVTFSLISGEALALARDMEAEVGRSFPKKQLITSIVSSTSRHDIDERQHGFASASRIAKSLQLTVLSLELPVADRVVHKANENAHVIFNYCNLTHGYGPDAQQNYAKLRSKLTLIK
Links
Other
AP-2
family TFs
Other
Pristionchus exspectatus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_036610
Albugo laibachii
ALNC14_036610
N
estExt_fgenesh1_kg.C_130512
Phytophthora capsici
estExt_fgenesh1_kg.C_130512
N
F443_05819
Phytophthora parasitica
F443_05819
N
fgenesh_scip_prom.28083.6518
Phytophthora lateralis
fgenesh_scip_prom.28083.6518
N
fgenesh_scip_prom.46568.10718
Phytophthora kernoviae
fgenesh_scip_prom.46568.10718
N
HpaG806187
Hyaloperonospora arabidopsidis
HpaG806187
N
maker-pag1_scaffold_286-fgenesh-gene-0.0
Pythium aphanidermatum
maker-pag1_scaffold_286-fgenesh-gene-0.0
N
maker-par_contig_3024-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_3024-snap-gene-0.1
N
maker-pir_contig_1166-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_1166-fgenesh-gene-0.3
N
maker-pve_contig_56-snap-gene-0.34
Pythium vexans
maker-pve_contig_56-snap-gene-0.34
N
Physo127065
Phytophthora sojae
Physo127065
N
PITG_00964
Phytophthora infestans
PITG_00964
N
PYU1_G001883
Pythium ultimum
PYU1_G001883
N