LALA0_S01e06304g (Lachancea lanzarotensis)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 LALA0_S01e06304g T012044_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SWI4
M00004_2.00 		Saccharomyces cerevisiae
RACGCGWW
WWCGCGTY		 PBM
Badis et al.(2008)
SWI4_4482 		0.651 0.723
SWI4
M07435_2.00 		Saccharomyces cerevisiae
DCGCGAAW
WTTCGCGH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0401.1 		0.651 0.723
SWI4
M08473_2.00 		Saccharomyces cerevisiae
DCGCGAAW
WTTCGCGH		 Misc
DeBoer et al.(2011)
YER111C_584 		0.651 0.723
SWI4
M09762_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$SWI4_Q6_01 		0.651 0.723
SWI4
M09763_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$SWI4_Q6 		0.651 0.723
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CEP60245 APSES 49 134

Links

Other APSES family TFs
Other Lachancea lanzarotensis TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
6438_YER111C Saccharomyces mikatae 6438_YER111C I 0.664
6569_YER111C Saccharomyces paradoxus 6569_YER111C I 0.664
6809_YER111C Saccharomyces bayanus 6809_YER111C I 0.677
AACERI_AaceriAGL297C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL297C N 0.676
AGOS_AGL297C Ashbya gossypii AGOS_AGL297C N 0.676
Ecym_7145 Eremothecium cymbalariae Ecym_7145 N 0.678
KAFR_0K01930 Kazachstania africana KAFR_0K01930 I 0.702
KLTH0C06270g Lachancea thermotolerans KLTH0C06270g N 0.860
KLTH0C06270g Kluyveromyces thermotolerans KLTH0C06270g N 0.860
Kwal_10756 Kluyveromyces waltii Kwal_10756 I 0.852
NCAS_0A14500 Naumovozyma castellii NCAS_0A14500 N 0.705
SAKL0F12870g Lachancea kluyveri SAKL0F12870g I 0.746
Scas_Contig510.2 Saccharomyces castellii Scas_Contig510.2 N 0.705
TDEL_0C02690 Torulaspora delbrueckii TDEL_0C02690 I 0.701
SWI4 Saccharomyces cerevisiae YER111C D 0.651
ZBAI_00748 Zygosaccharomyces bailii ZBAI_00748 I 0.758
ZBAI_06045 Zygosaccharomyces bailii ZBAI_06045 I 0.758
ZYRO0B03740g Zygosaccharomyces rouxii ZYRO0B03740g I 0.756