SCHCODRAFT_255230 (Schizophyllum commune)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 SCHCODRAFT_255230 T012314_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00 		PBM CONSTRUCTS
NNACGCGW
WCGCGTNN		 PBM
Lambert et al.(2019)
pTH9838 		0.871 1.000
ANIA_03154
M01650_2.00 		Aspergillus nidulans
NNACGCG
CGCGTNN		 PBM
Weirauch et al.(2014)
pTH8232 		0.792 0.562
NCU07246
M01653_2.00 		Neurospora crassa
NDCRCGN
NCGYGHN		 PBM
Weirauch et al.(2014)
pTH8957 		0.772 0.603
MBP1
M00003_2.00 		Saccharomyces cerevisiae
VACGCGWD
HWCGCGTB		 PBM
Badis et al.(2008)
MBP1_4486 		0.730 0.493
MBP1
M01514_2.00 		Saccharomyces cerevisiae
NNNNDCRCGH
DCGYGHNNNN		 PBM
Zhu et al.(2009)
Mbp1 		0.730 0.493
MBP1
M07434_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0329.1 		0.730 0.493
MBP1
M08472_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 Misc
DeBoer et al.(2011)
YDL056W_500 		0.730 0.493
NCU07587
M01654_2.00 		Neurospora crassa
NNNDCRCGN
NCGYGHNNN		 PBM
Weirauch et al.(2014)
pTH9687 		0.729 0.630
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ02013 APSES 39 114

Links

Other APSES family TFs
Other Schizophyllum commune TFs

438 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_07782 Schistosoma haematobium A_07782 N
csin102807 Clonorchis sinensis csin102807 N
D915_02053 Fasciola hepatica D915_02053 N
ECPE_0000696401 Echinostoma caproni ECPE_0000696401 N
SCUD_0001150501 Schistosoma curassoni SCUD_0001150501 N
Sjc_0095070 Schistosoma japonicum Sjc_0095070 N
SMRZ_0001505301 Schistosoma margrebowiei SMRZ_0001505301 N
SMTD_0001086501 Schistosoma mattheei SMTD_0001086501 N
SPER_0000333801 Spirometra erinaceieuropaei SPER_0000333801 N
SPER_0002114601 Spirometra erinaceieuropaei SPER_0002114601 N
SROB_0001540501 Schistosoma rodhaini SROB_0001540501 N
SSLN_0002064601 Schistocephalus solidus SSLN_0002064601 N
T265_11279 Opisthorchis viverrini T265_11279 N