BGIBMGA004104 (Bombyx mori)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 BGIBMGA004104 T014181_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.724 0.893
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.724 0.893
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.724 0.893
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.724 0.893
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.724 0.747
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.659 0.747
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.646 0.747
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.646 0.747
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.646 0.747
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.646 0.747
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.646 0.747
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.646 0.747
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.609 0.480
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.583 0.733
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.518 0.387
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.485 0.387
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA004104-TA ARID/BRIGHT 4 79

Links

Other ARID/BRIGHT family TFs
Other Bombyx mori TFs

373 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CERSUDRAFT_137619 Ceriporiopsis subvermispora CERSUDRAFT_137619 N
CY34DRAFT_772225 Suillus luteus CY34DRAFT_772225 N
DACRYDRAFT_100452 Dacryopinax sp DACRYDRAFT_100452 N
DICSQDRAFT_64693 Dichomitus squalens DICSQDRAFT_64693 N
fgenesh1_pg.C_scaffold_5000072 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_5000072 N
FIBRA_07605 Fibroporia radiculosa FIBRA_07605 N
FOMPIDRAFT_1116385 Fomitopsis pinicola FOMPIDRAFT_1116385 N
GALMADRAFT_246384 Galerina marginata GALMADRAFT_246384 N
GLOTRDRAFT_65551 Gloeophyllum trabeum GLOTRDRAFT_65551 N
GYMLUDRAFT_50070 Gymnopus luxurians GYMLUDRAFT_50070 N
HETIRDRAFT_479833 Heterobasidion irregulare HETIRDRAFT_479833 N
HYDPIDRAFT_99795 Hydnomerulius pinastri HYDPIDRAFT_99795 N
JAAARDRAFT_38766 Jaapia argillacea JAAARDRAFT_38766 N
K443DRAFT_129361 Laccaria amethystina K443DRAFT_129361 N
LACBIDRAFT_317073 Laccaria bicolor LACBIDRAFT_317073 N
M378DRAFT_75687 Amanita muscaria M378DRAFT_75687 N
M404DRAFT_15942 Pisolithus tinctorius M404DRAFT_15942 N
M413DRAFT_18957 Hebeloma cylindrosporum M413DRAFT_18957 N
Moror_4655 Moniliophthora roreri Moror_4655 N
PHACADRAFT_254069 Phanerochaete carnosa PHACADRAFT_254069 N
PHLGIDRAFT_78080 Phlebiopsis gigantea PHLGIDRAFT_78080 N
PILCRDRAFT_810475 Piloderma croceum PILCRDRAFT_810475 N
PISMIDRAFT_672167 Pisolithus microcarpus PISMIDRAFT_672167 N
PLEOSDRAFT_1073145 Pleurotus ostreatus PLEOSDRAFT_1073145 N
POSPLDRAFT_100778 Postia placenta POSPLDRAFT_100778 N
SCHCODRAFT_257495 Schizophyllum commune SCHCODRAFT_257495 N
SCLCIDRAFT_114536 Scleroderma citrinum SCLCIDRAFT_114536 N
SERLA73DRAFT_117697 Serpula lacrymans SERLA73DRAFT_117697 N