BGIOSGA005739 (Oryza indica)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 BGIOSGA005739 T014187_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.704 0.753
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.609 0.718
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA005739-PA ARID/BRIGHT 198 283

Links

Other ARID/BRIGHT family TFs
Other Oryza indica TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_3g077875 Medicago truncatula MTR_3g077875 N
MTR_5g006100 Medicago truncatula MTR_5g006100 N
MTR_5g079560 Medicago truncatula MTR_5g079560 N