BGIOSGA023283 (Oryza indica)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 BGIOSGA023283 T014190_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.724 0.835
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.629 0.753
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA023283-PA ARID/BRIGHT 166 251

Links

Other ARID/BRIGHT family TFs
Other Oryza indica TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP21606 Atta cephalotes ACEP21606 N
BGIBMGA004558 Bombyx mori BGIBMGA004558 N
Cflo_12071--XP_001122635.1_APIME Camponotus floridanus Cflo_12071--XP_001122635.1_APIME N
CLEC002198 Cimex lectularius CLEC002198 N
CLEC007074 Cimex lectularius CLEC007074 N
CLEC007177 Cimex lectularius CLEC007177 N
ENSAMXG00000013606 Astyanax mexicanus ENSAMXG00000013606 N
ENSCHOG00000011802 Choloepus hoffmanni ENSCHOG00000011802 N
arid1ab Danio rerio ENSDARG00000101891 N
arid1ab Gasterosteus aculeatus ENSGACG00000007627 N
ENSGMOG00000001024 Gadus morhua ENSGMOG00000001024 N
ENSGMOG00000019538 Gadus morhua ENSGMOG00000019538 N
ENSLOCG00000003798 Lepisosteus oculatus ENSLOCG00000003798 N
Kdm5d Mus musculus ENSMUSG00000056673 N
ENSOANG00000030531 Ornithorhynchus anatinus ENSOANG00000030531 N
ENSONIG00000007618 Oreochromis niloticus ENSONIG00000007618 N
ENSPFOG00000002208 Poecilia formosa ENSPFOG00000002208 N
ENSPMAG00000003030 Petromyzon marinus ENSPMAG00000003030 N
ENSPTRG00000021925 Pan troglodytes ENSPTRG00000021925 N
ENSPVAG00000010595 Pteropus vampyrus ENSPVAG00000010595 N
Kdm5c Rattus norvegicus ENSRNOG00000057706 N
KDM5C Sorex araneus ENSSARG00000000542 N
ENSSHAG00000000588 Sarcophilus harrisii ENSSHAG00000000588 N
ENSSSCG00000028486 Sus scrofa ENSSSCG00000028486 N
arid1aa Tetraodon nigroviridis ENSTNIG00000009659 N
arid1ab Takifugu rubripes ENSTRUG00000012325 N
ENSTSYG00000011521 Tarsius syrichta ENSTSYG00000011521 N
ENSXMAG00000010716 Xiphophorus maculatus ENSXMAG00000010716 N
GB52426 Apis mellifera GB52426 N
Gfo_R011571 Geospiza fortis Gfo_R011571 N
HelroG75856 Helobdella robusta HelroG75856 N
HMEL015554 Heliconius melpomene HMEL015554 N
KGM_20601 Danaus plexippus KGM_20601 N
MBM_08144 Marssonina brunnea MBM_08144 N
MCINX012993 Melitaea cinxia MCINX012993 N
ML16136a Mnemiopsis leidyi ML16136a N
NV16665 Nasonia vitripennis NV16665 N
XP_002934686 Xenopus tropicalis XP_002934686 N