LCUP005990 (Lucilia cuprina)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 LCUP005990 T016210_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.670 1.000
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.670 1.000
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.670 1.000
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.670 1.000
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.670 0.785
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.605 0.738
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.591 0.785
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.591 0.785
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.591 0.785
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.591 0.785
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.591 0.785
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.591 0.785
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.555 0.477
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.529 0.769
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.503 0.385
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.471 0.385
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP005990-PA ARID/BRIGHT 1 66

Links

Other ARID/BRIGHT family TFs
Other Lucilia cuprina TFs

362 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACHR008952 Anopheles christyi ACHR008952 I
AEPI008594 Anopheles epiroticus AEPI008594 I
ALUE_0001723601 Ascaris lumbricoides ALUE_0001723601 N
Bm8223 Brugia malayi Bm8223 N
CPIJ013490 Culex quinquefasciatus CPIJ013490 I
CpipJ_CPIJ013490 Culex pipiens CpipJ_CPIJ013490 I
D918_02241 Trichuris suis D918_02241 I
EEL_0000264201 Elaeophora elaphi EEL_0000264201 N
tead1b Danio rerio ENSDARG00000059483 I
Tead3 Dipodomys ordii ENSDORG00000010798 I
TEAD3 Microcebus murinus ENSMICG00000000029 I
TEAD1 Microcebus murinus ENSMICG00000007178 I
TEAD3 Macaca mulatta ENSMMUG00000015909 I
TEAD3 Pan troglodytes ENSPTRG00000018086 I
ENSSHAG00000015930 Sarcophilus harrisii ENSSHAG00000015930 I
e_gw.291.69.1 Branchiostoma floridae e_gw.291.69.1 I
nDi.2.2.2.g03142 Dirofilaria immitis nDi.2.2.2.g03142 N
nLs.2.1.2.g09300 Litomosoides sigmodontis nLs.2.1.2.g09300 N
nOo.2.0.1.g04457 Onchocerca ochengi nOo.2.0.1.g04457 N
PPAI001408 Phlebotomus papatasi PPAI001408 I
SMTD_0001953201 Schistosoma mattheei SMTD_0001953201 I
TCNE_0000788401 Toxocara canis TCNE_0000788401 N
WBGene00247727 Onchocerca volvulus WBGene00247727 N