CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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igs.C169-scaffold_21-gm_173
(
Chlorella vulgaris
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
igs.C169-scaffold_21-gm_173
T016298_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
igs.C169-scaffold_21-gm_173
ARID/BRIGHT
5
68
LRLNDSAIKGEDLWVPVMKAGGYEAVTSGKLWAAMGRHLGAPKGMTDLSHRVKKAYETQLLPFE
Links
Other
ARID/BRIGHT
family TFs
Other
Chlorella vulgaris
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Aa01831
Panicum virgatum
Pavir.Aa01831
N
Pavir.Aa02111
Panicum virgatum
Pavir.Aa02111
N
Pavir.Aa02230
Panicum virgatum
Pavir.Aa02230
N
Pavir.Ab01268
Panicum virgatum
Pavir.Ab01268
N
Pavir.Ia01183
Panicum virgatum
Pavir.Ia01183
N
Pavir.J12496
Panicum virgatum
Pavir.J12496
N
Si019235m.g
Setaria italica
Si019235m.g
N
Si019409m.g
Setaria italica
Si019409m.g
N
Si019546m.g
Setaria italica
Si019546m.g
N
Si019812m.g
Setaria italica
Si019812m.g
N
Si020174m.g
Setaria italica
Si020174m.g
N