Lus10030269.g (Linum usitatissimum)
AT hook

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02178 (AT_hook) IPR017956 Lus10030269.g T018034_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTR_4g101990
M01687_2.00 		Medicago truncatula
AAAWTAAT
ATTAWTTT		 PBM
Weirauch et al.(2014)
pTH9209 		0.991 0.923
PK00377.1
M01107_2.00 		Cannabis sativa
DAWWWAWW
WWTWWWTH		 PBM
Lambert et al.(2019)
pTH11338 		0.991 0.846
BRADI5G22430
M01674_2.00 		Brachypodium distachyon
VNRDDDHDD
HHDHHHYNB		 PBM
Weirauch et al.(2014)
pTH9242 		0.991 0.692
kmt2cb
M01679_2.00 		Danio rerio
WWAWAWAT
ATWTWTWW		 PBM
Weirauch et al.(2014)
pTH7876 		0.991 0.615
Setbp1
M01683_2.00 		Mus musculus
NDNNNNNNHN
NDNNNNNNHN		 PBM
Weirauch et al.(2014)
pTH1294 		0.991 0.615
Ahctf1
M00750_2.00 		Mus musculus
AAAWAWAW
ATWTWTTT		 PBM
Weirauch et al.(2013)
pTH2361 		0.991 0.615
Xrp1
M01686_2.00 		Drosophila melanogaster
NNNNDWAWW
WWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH9260 		0.991 0.615
PK26376.1
M01108_2.00 		Cannabis sativa
DDWWWAWW
WWTWWWHH		 PBM
Lambert et al.(2019)
pTH11261 		0.991 0.615
Xrp1
M05900_2.00 		Drosophila melanogaster
RTKRYGYAAT
ATTRCRYMAY		 B1H
Zhu et al.(2011)
Xrp1_CG6272_SANGER_5_FBgn0261113 		0.991 0.615
ATEG_07399
M01676_2.00 		Aspergillus terreus
DHNNHNDWWW
WWWHNDNNDH		 PBM
Weirauch et al.(2014)
pTH9237 		0.991 0.538
ENSACAG00000014978
M01677_2.00 		Anolis carolinensis
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9222 		0.991 0.538
phf21ab
M01678_2.00 		Danio rerio
NNNDNADW
WHTNHNNN		 PBM
Weirauch et al.(2014)
pTH9254 		0.991 0.538
phf21ab
M01680_2.00 		Gasterosteus aculeatus
AAAAWAAA
TTTWTTTT		 PBM
Weirauch et al.(2014)
pTH9180 		0.991 0.538
PHF21A
M01681_2.00 		Meleagris gallopavo
HDNHNNDNHD
HDNHNNDNHD		 PBM
Weirauch et al.(2014)
pTH7875 		0.991 0.538
PHF21A
M01103_2.00 		Monodelphis domestica
NNNAWATWAATN
NATTWATWTNNN		 PBM
Lambert et al.(2019)
pTH9309 		0.991 0.538
PHF21A
M01682_2.00 		Monodelphis domestica
NNNNNHRH
DYDNNNNN		 PBM
Weirauch et al.(2014)
pTH9335 		0.991 0.538
Phf21a
M01684_2.00 		Mus musculus
NNNATATWAATN
NATTWATATNNN		 PBM
Weirauch et al.(2014)
pTH8550 		0.991 0.538
AHL13
M01672_2.00 		Arabidopsis thaliana
NAWWTAWWWN
NWWWTAWWTN		 PBM
Weirauch et al.(2014)
pTH8202 		0.991 0.462
BRADI3G55950
M01673_2.00 		Brachypodium distachyon
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH9369 		0.991 0.462
OS02G0824300
M01688_2.00 		Oryza sativa
NNDWAWWN
NWWTWHNN		 PBM
Weirauch et al.(2014)
pTH8406 		0.991 0.462
estExt_fgeneshNG_pg.C_820014
M01692_2.00 		Naegleria gruberi
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9380 		0.991 0.462
VIT_08s0007g04020
M01689_2.00 		Vitis vinifera
DBNDDDDDDN
NHHHHHHNVH		 PBM
Weirauch et al.(2014)
pTH9295 		0.991 0.400
FGRRES_17512
M01105_2.00 		Fusarium graminearum
NNNDNWWWW
WWWWNHNNN		 PBM
Lambert et al.(2019)
pTH11412 		0.991 0.360
TVAG_474020
M01106_2.00 		Trichomonas vaginalis
DNWWWAWW
WWTWWWNH		 PBM
Lambert et al.(2019)
pTH11493 		0.991 0.346
SUM1
M00008_2.00 		Saccharomyces cerevisiae
NNDWWWH
DWWWHNN		 PBM
Badis et al.(2008)
SUM1_2124 		0.991 0.292
SUM1
M07439_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0398.1 		0.991 0.269
SUM1
M08478_2.00 		Saccharomyces cerevisiae
RYGWCASWAAW
WTTWSTGWCRY		 Misc
DeBoer et al.(2011)
YDR310C_383 		0.991 0.269
SUM1
M08479_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 Misc
DeBoer et al.(2011)
YDR310C_478 		0.991 0.269
Q7DLU9_PEA
M09772_2.00 		Pisum sativum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HMGIY_01 		0.991 0.231
ANIA_01690
M01675_2.00 		Aspergillus nidulans
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH8216 		0.991 0.216
ENSPPYG00000004736
M01685_2.00 		Pongo abelii
NNNNDWWW
WWWHNNNN		 PBM
Weirauch et al.(2014)
pTH9279 		0.991 0.211
NCU05635
M01694_2.00 		Neurospora crassa
NNNWWWWNNN
NNNWWWWNNN		 PBM
Weirauch et al.(2014)
pTH8863 		0.991 0.211
HMGA1
M09769_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_01 		0.991 0.205
HMGA1
M09770_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_Q4 		0.991 0.205
Hmga2
M00751_2.00 		Mus musculus
NNNNRHWWNN
NNWWDYNNNN		 PBM
Weirauch et al.(2013)
pTH3046 		0.991 0.179
HMGA2
M09771_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGA2_01 		0.991 0.179
FGRRES_05233
M01104_2.00 		Fusarium graminearum
NNNDWWAWWH
DWWTWWHNNN		 PBM
Lambert et al.(2019)
pTH11377 		0.991 0.154
HMGA
M01671_2.00 		Arabidopsis thaliana
NNNNDWAWH
DWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH7395 		0.991 0.115
HMG-I Y
M02652_2.00 		Pisum sativum
NDWVAAANRVMRWMAY
RTKWYKBYNTTTBWHN		 SELEX
Mathelier et al.(2014)
MA0045.1 		0.991 0.115
athp-3
M01691_2.00 		Caenorhabditis elegans
NNDDWDH
DHWHHNN		 PBM
Weirauch et al.(2014)
pTH9097 		0.991 0.113
hmg-12
M01690_2.00 		Caenorhabditis elegans
NNAWWTAWWTNN
NNAWWTAWWTNN		 PBM
Weirauch et al.(2014)
pTH8997 		0.991 0.099
NCU01145
M01693_2.00 		Neurospora crassa
RWATAWWTNN
NNAWWTATWY		 PBM
Weirauch et al.(2014)
pTH8916 		0.991 0.097
SUM1
M01517_2.00 		Saccharomyces cerevisiae
NNNDWAWW
WWTWHNNN		 PBM
Zhu et al.(2009)
Sum1 		0.991 0.000
For this family, TFs with SR scores > 0.990 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10030269 AT hook 59 71

Links

Other AT hook family TFs
Other Linum usitatissimum TFs

1072 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_07823 Capronia coronata A1O1_07823 I
A1O3_10149 Capronia epimyces A1O3_10149 I
A1O5_05843 Cladophialophora psammophila A1O5_05843 I
A1O5_07574 Cladophialophora psammophila A1O5_07574 I
A1O7_10006 Cladophialophora yegresii A1O7_10006 I
A1O9_08861 Exophiala aquamarina A1O9_08861 I
AOL_s00110g25 Arthrobotrys oligospora AOL_s00110g25 I
ARB_01680 Arthroderma benhamiae ARB_01680 I
BAUCODRAFT_33466 Baudoinia compniacensis BAUCODRAFT_33466 I
BBA_04990 Beauveria bassiana BBA_04990 I
Bcin04g06790 Botrytis cinerea Bcin04g06790 I
BDDG_09624 Blastomyces dermatitidis BDDG_09624 I
ACLA_081690 Aspergillus clavatus CADACLAG00007603 I
CADAFLAG00001559 Aspergillus flavus CADAFLAG00001559 I
CADAFLAG00005079 Aspergillus flavus CADAFLAG00005079 I
CADANGAG00006161 Aspergillus niger CADANGAG00006161 I
ANIA_05218 Aspergillus nidulans CADANIAG00003217 I
ANIA_04361 Aspergillus nidulans CADANIAG00006097 I
CADAORAG00003410 Aspergillus oryzae CADAORAG00003410 I
CADAORAG00008017 Aspergillus oryzae CADAORAG00008017 I
ATEG_05575 Aspergillus terreus CADATEAG00004870 I
ATEG_03672 Aspergillus terreus CADATEAG00009127 I
NFIA_053200 Neosartorya fischeri CADNFIAG00004377 N
CHGG_08220 Chaetomium globosum CHGG_08220 I
CIMG_04172 Coccidioides immitis CIMG_04172 I
CMQ_3347 Grosmannia clavigera CMQ_3347 I
Cob_07996 Colletotrichum orbiculare Cob_07996 I
CPC735_002490 Coccidioides posadasii CPC735_002490 I
DRE_04846 Drechslerella stenobrocha DRE_04846 I
E5Q_01003 Mixia osmundae E5Q_01003 I
EPUS_08958 Endocarpon pusillum EPUS_08958 I
estExt_fgenesh1_pg.C_10753 Sporobolomyces roseus estExt_fgenesh1_pg.C_10753 I
estExt_fgenesh1_pg.C_20710 Cryphonectria parasitica estExt_fgenesh1_pg.C_20710 I
estExt_fgenesh1_pg.C_sca_3_chr4_2_00209 Nectria haematococca estExt_fgenesh1_pg.C_sca_3_chr4_2_00209 I
EURHEDRAFT_377850 Aspergillus ruber EURHEDRAFT_377850 I
EURHEDRAFT_472160 Aspergillus ruber EURHEDRAFT_472160 I
EV44_g2242 Erysiphe necator EV44_g2242 I
e_gw1.00009.376.1 Aspergillus carbonarius e_gw1.00009.376.1 I
F503_01948 Ophiostoma piceae uamh F503_01948 I
fgenesh1_pm.00609_#_584 Aspergillus carbonarius fgenesh1_pm.00609_#_584 I
FGRRES_05171 Fusarium graminearum FGRRES_05171 I
FPSE_06572 Fusarium pseudograminearum FPSE_06572 I
G647_08273 Cladophialophora carrionii G647_08273 I
GMDG_05082 Pseudogymnoascus destructans GMDG_05082 I
GSTUM_00004031001 Tuber melanosporum GSTUM_00004031001 I
GSTUM_00008609001 Tuber melanosporum GSTUM_00008609001 I
H072_10866 Dactylellina haptotyla H072_10866 I
H101_07194 Trichophyton interdigitale H101_07194 I
H102_01270 Trichophyton rubrum H102_01270 I
H105_01284 Trichophyton soudanense H105_01284 I
HCBG_02259 Histoplasma capsulatum HCBG_02259 I
HMPREF1120_08717 Exophiala dermatitidis HMPREF1120_08717 I
HMPREF1541_02767 Cyphellophora europaea HMPREF1541_02767 I
HMPREF1624_03651 Sporothrix schenckii HMPREF1624_03651 I
K437DRAFT_226706 Tilletiaria anomala K437DRAFT_226706 I
LEMA_P046430.1 Leptosphaeria maculans LEMA_P046430.1 I
M7I_7549 Glarea lozoyensis M7I_7549 I
MAM_00920 Metarhizium album MAM_00920 I
MAPG_10034 Magnaporthe poae MAPG_10034 I
MCYG_01281 Microsporum canis MCYG_01281 I
MCYG_01281 Arthroderma otae MCYG_01281 I
MGG_14561 Magnaporthe oryzae MGG_14561 I
MGYG_01829 Microsporum gypseum MGYG_01829 I
MPH_01173 Macrophomina phaseolina MPH_01173 I
MVLG_04838 Microbotryum violaceum MVLG_04838 I
MYCFIDRAFT_214535 Pseudocercospora fijiensis MYCFIDRAFT_214535 I
MYCTH_57777 Myceliophthora thermophila MYCTH_57777 I
cys-3 Neurospora crassa NCU03536 D
NechaG99958 Fusarium solani NechaG99958 I
OIDMADRAFT_101511 Oidiodendron maius OIDMADRAFT_101511 I
PAAG_11856 Paracoccidioides sp lutzii PAAG_11856 I
PABG_04174 Paracoccidioides brasiliensis PABG_04174 I
Pc18g06160 Penicillium chrysogenum Pc18g06160 I
Pc22g17390 Penicillium chrysogenum Pc22g17390 I
PCH_Pc18g06160 Penicillium rubens PCH_Pc18g06160 I
PCH_Pc22g17390 Penicillium rubens PCH_Pc22g17390 I
PDE_05199 Penicillium oxalicum PDE_05199 I
PDE_06105 Penicillium oxalicum PDE_06105 I
PDIP_13730 Penicillium digitatum PDIP_13730 I
PDIP_70460 Penicillium digitatum PDIP_70460 I
PEX1_009430 Penicillium expansum PEX1_009430 I
PEX1_101830 Penicillium expansum PEX1_101830 I
PFICI_11424 Pestalotiopsis fici PFICI_11424 I
PFL1_03384 Pseudozyma flocculosa PFL1_03384 I
PHSY_007144 Pseudozyma hubeiensis PHSY_007144 I
PITC_070420 Penicillium italicum PITC_070420 I
PITC_087850 Penicillium italicum PITC_087850 I
PMAA_027760 Talaromyces marneffei PMAA_027760 I
PMAA_027760 Penicillium marneffei PMAA_027760 I
PODANS_6_4490 Podospora anserina PODANS_6_4490 I
PV04_10539 Capronia semiimmersa PV04_10539 I
PV05_03362 Exophiala xenobiotica PV05_03362 I
PV06_08450 Exophiala oligosperma PV06_08450 I
PV07_12300 Cladophialophora immunda PV07_12300 I
PV08_06754 Exophiala spinifera PV08_06754 I
PV09_03803 Verruconis gallopava PV09_03803 I
PV11_06042 Exophiala sideris PV11_06042 I
PVAR5_3614 Byssochlamys spectabilis PVAR5_3614 I
PVAR5_4159 Byssochlamys spectabilis PVAR5_4159 I
RHTO_00350 Rhodosporidium toruloides RHTO_00350 I
RO3G_12381 Rhizopus oryzae RO3G_12381 I
RO3G_16530 Rhizopus oryzae RO3G_16530 I
S40285_02008 Stachybotrys chlorohalonata S40285_02008 I
S40288_01688 Stachybotrys chartarum S40288_01688 I
SCHCODRAFT_257931 Schizophyllum commune SCHCODRAFT_257931 I
SJAG_04749 Schizosaccharomyces japonicus SJAG_04749 I
SMAC_07774 Sordaria macrospora SMAC_07774 I
SNOG_04964 Stagonospora nodorum SNOG_04964 I
SNOG_04964 Phaeosphaeria nodorum SNOG_04964 I
SOCG_04149 Schizosaccharomyces octosporus SOCG_04149 I
zip1 Schizosaccharomyces pombe SPAC25G10.03 D
SPBR_02042 Sporothrix brasiliensis SPBR_02042 I
SPOG_00393 Schizosaccharomyces cryophilus SPOG_00393 I
TEQG_06910 Trichophyton equinum TEQG_06910 I
TESG_01481 Trichophyton tonsurans TESG_01481 I
THITE_75012 Thielavia terrestris THITE_75012 I
TRIVIDRAFT_180261 Trichoderma virens TRIVIDRAFT_180261 I
TRV_00028 Trichophyton verrucosum TRV_00028 I
TSTA_070990 Talaromyces stipitatus TSTA_070990 I
U727_00431304101 Penicillium solitum U727_00431304101 I
U727_00434240161 Penicillium solitum U727_00434240161 I
UCRNP2_8660 Neofusicoccum parvum UCRNP2_8660 I
UCRPA7_8213 Togninia minima UCRPA7_8213 I
UREG_05605 Uncinocarpus reesii UREG_05605 I
V499_06269 Pseudogymnoascus pannorum V499_06269 I
VDAG_04042 Verticillium dahliae VDAG_04042 I
VHEMI00216 Torrubiella hemipterigena VHEMI00216 I
Z517_12228 Fonsecaea pedrosoi Z517_12228 I
Z518_06161 Rhinocladiella mackenziei Z518_06161 I
Z519_04890 Cladophialophora bantiana Z519_04890 I
Z519_06138 Cladophialophora bantiana Z519_06138 I