CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G018336
(
Zea mays
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
GRMZM2G018336
T019370_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.740
0.740
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G018336_P01
B3
53
161
FDKAVTPSDVGKLNRLVIPKQHAERHFPLHLAAAAGGGESTGVLLNLEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLQAGDVVGFYRSAAGADSKLFIDCKLR
Links
Other
B3
family TFs
Other
Zea mays
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R003102
Aptenodytes forsteri
Afo_R003102
N
0.000
FOXO1
Meleagris gallopavo
ENSMGAG00000015590
N
0.000
Tal_R009989
Tyto alba
Tal_R009989
N
0.000