POPTR_0011s05380 (Populus trichocarpa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 POPTR_0011s05380 T020885_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LEC2
M01695_2.00 		Arabidopsis thaliana
MTGCATGC
GCATGCAK		 PBM
Weirauch et al.(2014)
pTH8181 		0.710 0.710
LEC2
M02653_2.00 		Arabidopsis thaliana
NDDYGCATGNN
NNCATGCRHHN		 SELEX
Mathelier et al.(2014)
MA0581.1 		0.710 0.710
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0011s05380.1 B3 158 254

Links

Other B3 family TFs
Other Populus trichocarpa TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LEC2 Arabidopsis thaliana AT1G28300 D 0.710
Bostr.15697s0149 Boechera stricta Bostr.15697s0149 I 0.710
LEC2 Arabidopsis lyrata fgenesh2_kg.1__2994__AT1G28300.1 I 0.720
Gorai.006G087600 Gossypium raimondii Gorai.006G087600 I 0.763
Gorai.009G168500 Gossypium raimondii Gorai.009G168500 I 0.742
SapurV1A.0032s0310 Salix purpurea SapurV1A.0032s0310 N 0.914
Thhalv10009849m.g Eutrema salsugineum Thhalv10009849m.g I 0.742