CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold_601507.1
(
Arabidopsis lyrata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
scaffold_601507.1
T021185_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_601507.1
B3
10
101
FFSVFLSQYNSNSFLIPRSYYDHLPRRLPKTVILMGNGGKSWKVAMKSKRDQVYFEQGWANFVAENELRDGEVLTFVFDGHRCYEVSIYTRG
Links
Other
B3
family TFs
Other
Arabidopsis lyrata
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT3G06220
Arabidopsis thaliana
AT3G06220
N
0.728
Bostr.15530s0001
Boechera stricta
Bostr.15530s0001
N
0.728
Cagra.1036s0073
Capsella grandiflora
Cagra.1036s0073
N
0.739
Cagra.3793s0014
Capsella grandiflora
Cagra.3793s0014
N
0.707
Carubv10003750m.g
Capsella rubella
Carubv10003750m.g
N
0.750