CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_18s0001g11360
(
Vitis vinifera
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
VIT_18s0001g11360
T021920_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_18s0001g11360.t01
B3
9
100
FFEVFQPDASSERLKIPSRFIKHMEGRTSGFVSLVGPSDNTWHVDLIQQNSDLLLHDGWPVFVRDHCIECGDSLVFRYDGNLHFTVQVFDRS
VIT_18s0001g11360.t01
B3
264
360
FVRIMKKFNISGSYTLKIPYKFSMEHLPKCKIKIVLRNLKGDCWTVNSVPTTKVHTLHTFCGGWMAFVRGNGLKMGDICIFELVRKCEMRVHILGAG
VIT_18s0001g11360.t01
B3
494
589
FARFMKKFNISGSYTLKIPYQFSMAHLPKCKTEIVLRNLKGECWTVNSVPDTKGRMVHTFCGGWMAFVRGNDVKMGDICMFELVGKSEMLVHISGV
Links
Other
B3
family TFs
Other
Vitis vinifera
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_041400
Albugo laibachii
ALNC14_041400
N
fgenesh_masked-piw_contig_1000-abinit-gene-0.16
Pythium iwayamai
fgenesh_masked-piw_contig_1000-abinit-gene-0.16
N
gw1.1.2224.1
Fragilariopsis cylindrus
gw1.1.2224.1
N
gw1.11.315.1
Phytophthora capsici
gw1.11.315.1
N
maker-pag1_scaffold_350-snap-gene-0.14
Pythium aphanidermatum
maker-pag1_scaffold_350-snap-gene-0.14
N
maker-par_contig_1488-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_1488-fgenesh-gene-0.0
N
maker-pir_contig_324-snap-gene-0.12
Pythium irregulare
maker-pir_contig_324-snap-gene-0.12
N
maker-pve_contig_166-fgenesh-gene-0.3
Pythium vexans
maker-pve_contig_166-fgenesh-gene-0.3
N
Physo156164
Phytophthora sojae
Physo156164
N
PYU1_G005945
Pythium ultimum
PYU1_G005945
N
SPRG_03236
Saprolegnia parasitica
SPRG_03236
N