CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
cassava11456.m1
(
Manihot esculenta
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
cassava11456.m1
T022217_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava11456.m1
B3
76
177
FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNSWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRL
cassava11456.m1
B3
422
466
KLEDMFDIEGELSGSTKKWQVVYTDDEDDMMMVGDDPWHEFCSMV
Links
Other
B3
family TFs
Other
Manihot esculenta
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA025272
Oryza indica
BGIOSGA025272
N
OBART07G05360
Oryza barthii
OBART07G05360
N
OGLUM07G04880
Oryza glumaepatula
OGLUM07G04880
N
OLONG_007501
Oryza longistaminata
OLONG_007501
N
ONIVA07G04110
Oryza nivara
ONIVA07G04110
N
ORGLA07G0045100
Oryza glaberrima
ORGLA07G0045100
N
ORUFI07G05160
Oryza rufipogon
ORUFI07G05160
N