CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf005961m
(
Mimulus guttatus
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
mgf005961m
T022465_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN
NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.918
0.918
ARF5
M06701_2.00
Arabidopsis thaliana
WYTTGTCGGN
NCCGACAARW
Dap-seq
OMalley et al.(2016)
MP_col
0.755
0.755
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf005961m
B3
128
230
FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHNNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRAN
Links
Other
B3
family TFs
Other
Mimulus guttatus
TFs
610 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AEPI007690
Anopheles epiroticus
AEPI007690
N
AQUA010005
Anopheles quadriannulatus
AQUA010005
N
CRE14961
Caenorhabditis remanei
CRE14961
N
Hba_03945
Heterorhabditis bacteriophora
Hba_03945
N
HPBE_0002614101
Heligmosomoides bakeri
HPBE_0002614101
N
MVLG_02484
Microbotryum violaceum
MVLG_02484
N
nRc.2.0.1.g19814
Romanomermis culicivorax
nRc.2.0.1.g19814
N