CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0050s0013
(
Capsella grandiflora
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Cagra.0050s0013
T022713_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0050s0013.1.p
B3
43
149
FDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRP
Links
Other
B3
family TFs
Other
Capsella grandiflora
TFs
261 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CADANGAG00013191
Aspergillus niger
CADANGAG00013191
I
0.000
ANIA_01536
Aspergillus nidulans
CADANIAG00008163
D
0.000
ATEG_04779
Aspergillus terreus
CADATEAG00007874
I
0.000
CFIO01_10230
Colletotrichum fioriniae
CFIO01_10230
I
0.000
CHGG_05948
Chaetomium globosum
CHGG_05948
I
0.000
Cob_12403
Colletotrichum orbiculare
Cob_12403
I
0.000
CTHT_0003390
Chaetomium thermophilum
CTHT_0003390
I
0.000
estExt_fgenesh3_kg.C_40162
Neurospora discreta
estExt_fgenesh3_kg.C_40162
I
0.000
FFUJ_01033
Fusarium fujikuroi
FFUJ_01033
I
0.000
fgenesh1_pg.C_scaffold_5000767
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_5000767
I
0.000
FOXG_00543
Fusarium oxysporum
FOXG_00543
I
0.000
FVEG_00971
Fusarium verticillioides
FVEG_00971
I
0.000
HMPREF1624_07612
Sporothrix schenckii
HMPREF1624_07612
I
0.000
MYCTH_2297012
Myceliophthora thermophila
MYCTH_2297012
I
0.000
ada-1
Neurospora crassa
NCU00499
D
0.000
NEUTE1DRAFT_119203
Neurospora tetrasperma
NEUTE1DRAFT_119203
I
0.000
PDE_06458
Penicillium oxalicum
PDE_06458
I
0.000
PFICI_01318
Pestalotiopsis fici
PFICI_01318
I
0.000
PMAA_009160
Talaromyces marneffei
PMAA_009160
I
0.000
PMAA_009160
Penicillium marneffei
PMAA_009160
I
0.000
PVAR5_2855
Byssochlamys spectabilis
PVAR5_2855
I
0.000
SPBR_06799
Sporothrix brasiliensis
SPBR_06799
I
0.000
THITE_2112457
Thielavia terrestris
THITE_2112457
I
0.000
TRIATDRAFT_182347
Trichoderma atroviride
TRIATDRAFT_182347
I
0.000
TRIREDRAFT_73654
Trichoderma reesei
TRIREDRAFT_73654
I
0.000
TRIVIDRAFT_212339
Trichoderma virens
TRIVIDRAFT_212339
I
0.000
TSTA_058790
Talaromyces stipitatus
TSTA_058790
I
0.000
UV8b_4299
Ustilaginoidea virens
UV8b_4299
I
0.000