Carubv10001689m.g (Capsella rubella)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Carubv10001689m.g T022816_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10001689m B3 45 153
Carubv10001768m B3 45 153

Links

Other B3 family TFs
Other Capsella rubella TFs

265 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
16040_YML099C Saccharomyces mikatae 16040_YML099C I
17710_YML099C Saccharomyces paradoxus 17710_YML099C I
18194_YML099C Saccharomyces bayanus 18194_YML099C I
AACERI_AaceriAAL175W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL175W I
AGOS_AAL175W Ashbya gossypii AGOS_AAL175W I
CaO19.10262 Candida albicans CaO19.10262 I
CaO19.2748 Candida albicans CaO19.2748 I
CD36_42420 Candida dubliniensis CD36_42420 I
CORT_0E00270 Candida orthopsilosis CORT_0E00270 I
CPAG_00315 Candida parapsilosis CPAG_00315 I
CTRG_00138 Candida tropicalis CTRG_00138 I
DEHA2E16302g Debaryomyces hansenii DEHA2E16302g I
Ecym_8159 Eremothecium cymbalariae Ecym_8159 I
e_gww1.1.1.1491.1 Pichia stipitis e_gww1.1.1.1491.1 I
G210_1017 Candida maltosa G210_1017 I
GNLVRS01_PISO0M20692g Millerozyma farinosa GNLVRS01_PISO0M20692g I
GNLVRS01_PISO0N20935g Millerozyma farinosa GNLVRS01_PISO0N20935g I
KAFR_0L02130 Kazachstania africana KAFR_0L02130 I
KLLA0_D10197g Kluyveromyces lactis KLLA0_D10197g I
KLTH0E16500g Lachancea thermotolerans KLTH0E16500g I
KLTH0E16500g Kluyveromyces thermotolerans KLTH0E16500g I
KNAG_0J00210 Kazachstania naganishii KNAG_0J00210 I
Kpol_538p52 Vanderwaltozyma polyspora Kpol_538p52 I
Kwal_9688 Kluyveromyces waltii Kwal_9688 I
LALA0_S01e00826g Lachancea lanzarotensis LALA0_S01e00826g I
LELG_04177 Lodderomyces elongisporus LELG_04177 I
NCAS_0C00220 Naumovozyma castellii NCAS_0C00220 I
NDAI_0K00150 Naumovozyma dairenensis NDAI_0K00150 I
PGUG_03209 Candida guilliermondii PGUG_03209 I
PGUG_03209 Meyerozyma guilliermondii PGUG_03209 I
SAKL0D00264g Lachancea kluyveri SAKL0D00264g I
Scas_Contig626.6 Saccharomyces castellii Scas_Contig626.6 I
SKUD_195006 Saccharomyces kudriavzevii SKUD_195006 I
SPAPADRAFT_69629 Spathaspora passalidarum SPAPADRAFT_69629 I
SU7_2431 Saccharomyces arboricola SU7_2431 I
TDEL_0B00480 Torulaspora delbrueckii TDEL_0B00480 I
TRIATDRAFT_141953 Trichoderma atroviride TRIATDRAFT_141953 I
YALI0_D09647g Yarrowia lipolytica YALI0_D09647g I
ARG81 Saccharomyces cerevisiae YML099C D
ZBAI_03002 Zygosaccharomyces bailii ZBAI_03002 I
ZBAI_08687 Zygosaccharomyces bailii ZBAI_08687 I
ZYRO0A00440g Zygosaccharomyces rouxii ZYRO0A00440g I