CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10009540m.g
(
Capsella rubella
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Carubv10009540m.g
T022850_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10009540m
B3
56
162
FDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRP
Links
Other
B3
family TFs
Other
Capsella rubella
TFs
193 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_06180
Capronia epimyces
A1O3_06180
N
0.000
A1O5_12014
Cladophialophora psammophila
A1O5_12014
N
0.000
CMQ_7531
Grosmannia clavigera
CMQ_7531
N
0.000
EPUS_00914
Endocarpon pusillum
EPUS_00914
N
0.000
estExt_Genewise1Plus.C_190205
Neurospora discreta
estExt_Genewise1Plus.C_190205
N
0.000
PV04_10849
Capronia semiimmersa
PV04_10849
N
0.000
PV06_11815
Exophiala oligosperma
PV06_11815
N
0.000
PV07_08572
Cladophialophora immunda
PV07_08572
N
0.000
PV07_12865
Cladophialophora immunda
PV07_12865
N
0.000
PV11_05146
Exophiala sideris
PV11_05146
N
0.000
SAPIO_CDS5410
Scedosporium apiospermum
SAPIO_CDS5410
N
0.000
Z518_05999
Rhinocladiella mackenziei
Z518_05999
N
0.000