CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10016094m.g
(
Capsella rubella
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Carubv10016094m.g
T022875_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10016094m
B3
573
674
LQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISLAMEDIGTSRVWNMRYRFWPNNKSRMYLLENTGDFVKTNGLQEGDFIVIYSDVKCGKYLIRGVKV
Links
Other
B3
family TFs
Other
Capsella rubella
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZSCAN9
Bos taurus
ENSBTAG00000040168
I
0.000
ZSCAN9
Callithrix jacchus
ENSCJAG00000018658
I
0.000
ZSCAN9
Equus caballus
ENSECAG00000015075
I
0.000
ZSCAN9
Homo sapiens
ENSG00000137185
D
0.000
ZSCAN9
Gorilla gorilla
ENSGGOG00000000688
I
0.000
ZSCAN9
Microcebus murinus
ENSMICG00000010443
I
0.000
ZSCAN9
Macaca mulatta
ENSMMUG00000002537
I
0.000
ENSNLEG00000004504
Nomascus leucogenys
ENSNLEG00000004504
I
0.000
ENSP00000404074
Macaca fascicularis
ENSP00000404074
I
0.000
ENSPANG00000013432
Papio anubis
ENSPANG00000013432
I
0.000
ENSPPYG00000029879
Pongo abelii
ENSPPYG00000029879
I
0.000
ZSCAN9
Pan troglodytes
ENSPTRG00000017870
I
0.000
ZSCAN9
Sus scrofa
ENSSSCG00000001203
I
0.000
ENSTSYG00000006203
Tarsius syrichta
ENSTSYG00000006203
I
0.000
ZSCAN9
Tursiops truncatus
ENSTTRG00000013203
I
0.000