CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_57.71
(
Carica papaya
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
evm.TU.supercontig_57.71
T023142_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.713
0.713
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_57.71
B3
34
139
FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDASSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGELGKDRLYIDWRRRP
Links
Other
B3
family TFs
Other
Carica papaya
TFs
315 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG016702.1
Alligator sinensis
Alligator_sinensis_CCG016702.1
I
Cmyd_10001850
Chelonia mydas
Cmyd_10001850
I
ZBTB22
Anolis carolinensis
ENSACAG00000008573
I
ENSAMEG00000019741
Ailuropoda melanoleuca
ENSAMEG00000019741
I
ZBTB22
Bos taurus
ENSBTAG00000016829
I
ENSBTAP00000022387-D1
Bos grunniens
ENSBTAP00000022387-D1
I
ZBTB22
Canis familiaris
ENSCAFG00000000977
I
ZBTB22
Callithrix jacchus
ENSCJAG00000021676
I
ENSCPOG00000022843
Cavia porcellus
ENSCPOG00000022843
I
ENSCSAG00000019307
Chlorocebus sabaeus
ENSCSAG00000019307
I
Zbtb22
Dipodomys ordii
ENSDORG00000013837
I
ZBTB22
Equus caballus
ENSECAG00000019536
I
ZBTB22
Homo sapiens
ENSG00000236104
D
ZBTB22
Gorilla gorilla
ENSGGOG00000006597
I
ZBTB22
Loxodonta africana
ENSLAFG00000018510
I
ENSMEUG00000002692
Macropus eugenii
ENSMEUG00000002692
I
ZBTB22
Myotis lucifugus
ENSMLUG00000017554
I
ZBTB22
Macaca mulatta
ENSMMUG00000003876
I
ENSMPUG00000018787
Mustela putorius furo
ENSMPUG00000018787
I
Zbtb22
Mus musculus
ENSMUSG00000051390
I
ENSOARG00000009465
Ovis aries
ENSOARG00000009465
I
ZBTB22
Oryctolagus cuniculus
ENSOCUG00000010568
I
ZBTB22
Otolemur garnettii
ENSOGAG00000033956
I
zbtb22b
Oryzias latipes
ENSORLG00000006852
I
ENSP00000372683
Macaca fascicularis
ENSP00000372683
I
ENSPANG00000007019
Papio anubis
ENSPANG00000007019
I
ZBTB22
Procavia capensis
ENSPCAG00000006256
I
ENSPPYG00000017249
Pongo abelii
ENSPPYG00000017249
I
ENSPSIG00000005781
Pelodiscus sinensis
ENSPSIG00000005781
I
ZBTB22
Pan troglodytes
ENSPTRG00000018044
I
ZBTB22
Pteropus vampyrus
ENSPVAG00000001913
I
Zbtb22
Rattus norvegicus
ENSRNOG00000000476
I
ENSSHAG00000007426
Sarcophilus harrisii
ENSSHAG00000007426
I
ENSSSCG00000001508
Sus scrofa
ENSSSCG00000001508
I
ENSSTOG00000021763
Ictidomys tridecemlineatus
ENSSTOG00000021763
I
zbtb22b
Tetraodon nigroviridis
ENSTNIG00000000019
I
zbtb22b
Takifugu rubripes
ENSTRUG00000003954
I
Myotis_brandtii_ZBTB22_10004256
Myotis brandtii
Myotis_brandtii_ZBTB22_10004256
I
Pvit_19024
Pogona vitticeps
Pvit_19024
I
zbtb22
Xenopus tropicalis
XB-GENE-6458515
I