CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Genemark1.2498_g
(
Coccomyxa subellipsoidea C169
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Genemark1.2498_g
T023283_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
61708
B3
242
339
VAKALTKSDTAGRVILPRVSVESNLSFLMGYRSYSLPVKDRAGRAWEFVIKSWANGTEHRRVYVLEQVSEYIKVNRLREGDTIGICADEDGVVTIEAN
61708
B3
508
599
SQNVLLLAEQVEAALPAECAGAGLVRLHARDRHGRTWELLLRAWKDPAGSAGGRARMLMLEQAAGFLKDRGAKPGDHLMLHRPPDGPLSMEA
Links
Other
B3
family TFs
Other
Coccomyxa subellipsoidea C169
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgeneshCV_pg.C_scaffold_4000403
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_4000403
N
0.994