CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.003G073600
(
Gossypium raimondii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Gorai.003G073600
T023315_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.713
0.713
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.003G073600.1
B3
101
206
FDKVVTPSDVGKLNRLVIPKQHAEKHFPLDSSTNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGELGKHRLFIDWRRRP
Links
Other
B3
family TFs
Other
Gossypium raimondii
TFs
289 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CY34DRAFT_809750
Suillus luteus
CY34DRAFT_809750
N
FIBRA_04347
Fibroporia radiculosa
FIBRA_04347
N
FOMPIDRAFT_1050634
Fomitopsis pinicola
FOMPIDRAFT_1050634
N
GALMADRAFT_218883
Galerina marginata
GALMADRAFT_218883
N
GLOTRDRAFT_134823
Gloeophyllum trabeum
GLOTRDRAFT_134823
N
HETIRDRAFT_413015
Heterobasidion irregulare
HETIRDRAFT_413015
N
JAAARDRAFT_358376
Jaapia argillacea
JAAARDRAFT_358376
N
K443DRAFT_131968
Laccaria amethystina
K443DRAFT_131968
N
LACBIDRAFT_301549
Laccaria bicolor
LACBIDRAFT_301549
N
M404DRAFT_998487
Pisolithus tinctorius
M404DRAFT_998487
N
M413DRAFT_199687
Hebeloma cylindrosporum
M413DRAFT_199687
N
Moror_1728
Moniliophthora roreri
Moror_1728
N
PHLGIDRAFT_130292
Phlebiopsis gigantea
PHLGIDRAFT_130292
N
PILCRDRAFT_820707
Piloderma croceum
PILCRDRAFT_820707
N
PISMIDRAFT_447413
Pisolithus microcarpus
PISMIDRAFT_447413
N
SCLCIDRAFT_494343
Scleroderma citrinum
SCLCIDRAFT_494343
N