CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.005G105400
(
Gossypium raimondii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Gorai.005G105400
T023325_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.005G105400.1
B3
9
100
FLNVFSSTSSANSLRIPVGFNRNLEGRVSASVLLKGPSGYSWNVKLVQRNDDLLFDEGWADFVADHSLECGDFLVFRYDGDLVFEVKVFDQS
Gorai.005G105400.1
B3
226
322
FVRIMKRFNVSGSYTLNIPYQFAMEHLPNCKTELVLQNLKGACWTVNSVPTTRVHTSHTLCGGWLSFVRSNEIKAGDICIFELVHKFEFRVHILRVG
Gorai.005G105400.1
B3
428
522
FVRIMRKFNISGSYTLKIPYKFSKEHLPYCKTQVVLRNLQGKCWTVNSLPDSKGRAVHTFCGGWMAFVRDNEIKIGDICIFELVNNYEMRVHISG
Gorai.005G105400.2
B3
9
100
FLNVFSSTSSANSLRIPVGFNRNLEGRVSASVLLKGPSGYSWNVKLVQRNDDLLFDEGWADFVADHSLECGDFLVFRYDGDLVFEVKVFDQS
Gorai.005G105400.2
B3
226
322
FVRIMKRFNVSGSYTLNIPYQFAMEHLPNCKTELVLQNLKGACWTVNSVPTTRVHTSHTLCGGWLSFVRSNEIKAGDICIFELVHKFEFRVHILRVG
Gorai.005G105400.2
B3
428
522
FVRIMRKFNISGSYTLKIPYKFSKEHLPYCKTQVVLRNLQGKCWTVNSLPDSKGRAVHTFCGGWMAFVRDNEIKIGDICIFELVNNYEMRVHISG
Gorai.005G105400.3
B3
9
100
FLNVFSSTSSANSLRIPVGFNRNLEGRVSASVLLKGPSGYSWNVKLVQRNDDLLFDEGWADFVADHSLECGDFLVFRYDGDLVFEVKVFDQS
Gorai.005G105400.3
B3
226
322
FVRIMKRFNVSGSYTLNIPYQFAMEHLPNCKTELVLQNLKGACWTVNSVPTTRVHTSHTLCGGWLSFVRSNEIKAGDICIFELVHKFEFRVHILRVG
Gorai.005G105400.3
B3
427
521
FVRIMRKFNISGSYTLKIPYKFSKEHLPYCKTQVVLRNLQGKCWTVNSLPDSKGRAVHTFCGGWMAFVRDNEIKIGDICIFELVNNYEMRVHISG
Gorai.005G105400.4
B3
9
100
FLNVFSSTSSANSLRIPVGFNRNLEGRVSASVLLKGPSGYSWNVKLVQRNDDLLFDEGWADFVADHSLECGDFLVFRYDGDLVFEVKVFDQS
Gorai.005G105400.4
B3
226
322
FVRIMKRFNVSGSYTLNIPYQFAMEHLPNCKTELVLQNLKGACWTVNSVPTTRVHTSHTLCGGWLSFVRSNEIKAGDICIFELVHKFEFRVHILRVG
Gorai.005G105400.4
B3
426
520
FVRIMRKFNISGSYTLKIPYKFSKEHLPYCKTQVVLRNLQGKCWTVNSLPDSKGRAVHTFCGGWMAFVRDNEIKIGDICIFELVNNYEMRVHISG
Gorai.005G105400.5
B3
21
117
FVRIMKRFNVSGSYTLNIPYQFAMEHLPNCKTELVLQNLKGACWTVNSVPTTRVHTSHTLCGGWLSFVRSNEIKAGDICIFELVHKFEFRVHILRVG
Gorai.005G105400.5
B3
223
317
FVRIMRKFNISGSYTLKIPYKFSKEHLPYCKTQVVLRNLQGKCWTVNSLPDSKGRAVHTFCGGWMAFVRDNEIKIGDICIFELVNNYEMRVHISG
Gorai.005G105400.6
B3
21
117
FVRIMKRFNVSGSYTLNIPYQFAMEHLPNCKTELVLQNLKGACWTVNSVPTTRVHTSHTLCGGWLSFVRSNEIKAGDICIFELVHKFEFRVHILRVG
Gorai.005G105400.6
B3
223
317
FVRIMRKFNISGSYTLKIPYKFSKEHLPYCKTQVVLRNLQGKCWTVNSLPDSKGRAVHTFCGGWMAFVRDNEIKIGDICIFELVNNYEMRVHISG
Gorai.005G105400.7
B3
9
100
FLNVFSSTSSANSLRIPVGFNRNLEGRVSASVLLKGPSGYSWNVKLVQRNDDLLFDEGWADFVADHSLECGDFLVFRYDGDLVFEVKVFDQS
Gorai.005G105400.7
B3
226
322
FVRIMKRFNVSGSYTLNIPYQFAMEHLPNCKTELVLQNLKGACWTVNSVPTTRVHTSHTLCGGWLSFVRSNEIKAGDICIFELVHKFEFRVHILRVG
Gorai.005G105400.7
B3
428
522
FVRIMRKFNISGSYTLKIPYKFSKEHLPYCKTQVVLRNLQGKCWTVNSLPDSKGRAVHTFCGGWMAFVRDNEIKIGDICIFELVNNYEMRVHISG
Links
Other
B3
family TFs
Other
Gossypium raimondii
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0525s0070
Salix purpurea
SapurV1A.0525s0070
N
0.702
TCM_033935
Theobroma cacao
TCM_033935
N
0.855