Gorai.010G046000 (Gossypium raimondii)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Gorai.010G046000 T023380_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.732 0.732
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G046000.1 B3 116 218

Links

Other B3 family TFs
Other Gossypium raimondii TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10003336 Chelonia mydas Cmyd_10003336 I 0.000
grhl1 Danio rerio ENSDARG00000061391 I 0.000
grhl2a Gasterosteus aculeatus ENSGACG00000003655 I 0.000
ENSGMOG00000003256 Gadus morhua ENSGMOG00000003256 I 0.000
ENSONIG00000006874 Oreochromis niloticus ENSONIG00000006874 N 0.000
ENSPFOG00000010589 Poecilia formosa ENSPFOG00000010589 N 0.000
ENSPMAG00000005876 Petromyzon marinus ENSPMAG00000005876 I 0.000
ENSSTOG00000019842 Ictidomys tridecemlineatus ENSSTOG00000019842 I 0.000
ENSTGUG00000012086 Taeniopygia guttata ENSTGUG00000012086 I 0.000
ENSTGUG00000014574 Taeniopygia guttata ENSTGUG00000014574 I 0.000
grhl2a Tetraodon nigroviridis ENSTNIG00000013309 I 0.000
grhl2b Takifugu rubripes ENSTRUG00000002119 I 0.000
grhl2a Takifugu rubripes ENSTRUG00000011936 N 0.000
ENSXMAG00000002574 Xiphophorus maculatus ENSXMAG00000002574 N 0.000
Tal_R009556 Tyto alba Tal_R009556 I 0.000