CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Fa02368
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Fa02368
T023854_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IDEF1
M09774_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$IDEF1_Q2
0.794
0.794
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Fa02368.1.p
B3
254
355
LRKELTKSDVANVGRIVLPKKDAEASLPPLVQGDPLILQMDDMVLPVTWKFKYRFWPNNKSRMYILEAAGEFVKTHGLQAGDALIIYKNSVPGKFIIRAEKA
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_04095
Capronia coronata
A1O1_04095
N
0.000
A1O5_10088
Cladophialophora psammophila
A1O5_10088
N
0.000
A1O7_05748
Cladophialophora yegresii
A1O7_05748
N
0.000
A1O9_04250
Exophiala aquamarina
A1O9_04250
N
0.000
AB06078.1
Alternaria brassicicola
AB06078.1
N
0.000
AOL_s00097g46
Arthrobotrys oligospora
AOL_s00097g46
N
0.000
ARB_04542
Arthroderma benhamiae
ARB_04542
N
0.000
AUEXF2481DRAFT_27191
Aureobasidium subglaciale
AUEXF2481DRAFT_27191
N
0.000
BAUCODRAFT_34049
Baudoinia compniacensis
BAUCODRAFT_34049
N
0.000
BBA_07259
Beauveria bassiana
BBA_07259
N
0.000
BDDG_07653
Blastomyces dermatitidis
BDDG_07653
N
0.000
BGHDH14_bgh02243
Blumeria graminis
BGHDH14_bgh02243
N
0.000
CADAFLAG00000799
Aspergillus flavus
CADAFLAG00000799
N
0.000
AFUA_1G03210
Aspergillus fumigatus
CADAFUAG00009239
N
0.000
CADANGAG00000476
Aspergillus niger
CADANGAG00000476
N
0.000
CADAORAG00002728
Aspergillus oryzae
CADAORAG00002728
N
0.000
ATEG_02532
Aspergillus terreus
CADATEAG00003645
N
0.000
NFIA_021310
Neosartorya fischeri
CADNFIAG00000827
N
0.000
CFIO01_13194
Colletotrichum fioriniae
CFIO01_13194
N
0.000
CGGC5_975
Colletotrichum gloeosporioides
CGGC5_975
N
0.000
CH063_12954
Colletotrichum higginsianum
CH063_12954
N
0.000
CIMG_04804
Coccidioides immitis
CIMG_04804
N
0.000
Cob_01758
Colletotrichum orbiculare
Cob_01758
N
0.000
COCC4DRAFT_54097
Bipolaris maydis
COCC4DRAFT_54097
N
0.000
COCCADRAFT_88089
Bipolaris zeicola
COCCADRAFT_88089
N
0.000
COCMIDRAFT_25841
Bipolaris oryzae
COCMIDRAFT_25841
N
0.000
COCSADRAFT_221816
Bipolaris sorokiniana
COCSADRAFT_221816
N
0.000
COCVIDRAFT_99762
Bipolaris victoriae
COCVIDRAFT_99762
N
0.000
CPC735_070400
Coccidioides posadasii
CPC735_070400
N
0.000
CSUB01_05390
Colletotrichum sublineola
CSUB01_05390
N
0.000
DOTSEDRAFT_69606
Dothistroma septosporum
DOTSEDRAFT_69606
N
0.000
DRE_02746
Drechslerella stenobrocha
DRE_02746
N
0.000
EPUS_03928
Endocarpon pusillum
EPUS_03928
N
0.000
estExt_Genewise1.C_chr_100086
Mycosphaerella graminicola
estExt_Genewise1.C_chr_100086
N
0.000
EURHEDRAFT_404004
Aspergillus ruber
EURHEDRAFT_404004
N
0.000
EV44_g2178
Erysiphe necator
EV44_g2178
N
0.000
e_gw1.14.414.1
Mycosphaerella fijiensis
e_gw1.14.414.1
N
0.000
e_gw1.14.618.1
Nectria haematococca
e_gw1.14.618.1
N
0.000
fgenesh1_pm.00129_#_356
Aspergillus carbonarius
fgenesh1_pm.00129_#_356
N
0.000
FGRRES_01915
Fusarium graminearum
FGRRES_01915
N
0.000
FPSE_09133
Fusarium pseudograminearum
FPSE_09133
N
0.000
G647_06777
Cladophialophora carrionii
G647_06777
N
0.000
GGTG_14195
Gaeumannomyces graminis
GGTG_14195
N
0.000
GLRG_01306
Colletotrichum graminicola
GLRG_01306
N
0.000
GMDG_02112
Pseudogymnoascus destructans
GMDG_02112
N
0.000
GMDG_03182
Pseudogymnoascus destructans
GMDG_03182
N
0.000
GSTUM_00009849001
Tuber melanosporum
GSTUM_00009849001
N
0.000
H072_5668
Dactylellina haptotyla
H072_5668
N
0.000
H101_07912
Trichophyton interdigitale
H101_07912
N
0.000
H102_02396
Trichophyton rubrum
H102_02396
N
0.000
H105_02417
Trichophyton soudanense
H105_02417
N
0.000
HCBG_00682
Histoplasma capsulatum
HCBG_00682
N
0.000
HMPREF1120_08485
Exophiala dermatitidis
HMPREF1120_08485
N
0.000
HMPREF1541_08408
Cyphellophora europaea
HMPREF1541_08408
N
0.000
M437DRAFT_83846
Aureobasidium melanogenum
M437DRAFT_83846
N
0.000
M438DRAFT_97521
Aureobasidium pullulans
M438DRAFT_97521
N
0.000
MAPG_03921
Magnaporthe poae
MAPG_03921
N
0.000
MBM_01244
Marssonina brunnea
MBM_01244
N
0.000
MCYG_05945
Microsporum canis
MCYG_05945
N
0.000
MCYG_05945
Arthroderma otae
MCYG_05945
N
0.000
MGYG_06020
Microsporum gypseum
MGYG_06020
N
0.000
MYCFIDRAFT_39346
Pseudocercospora fijiensis
MYCFIDRAFT_39346
N
0.000
Mycgr3G62856
Zymoseptoria tritici
Mycgr3G62856
N
0.000
NechaG50578
Fusarium solani
NechaG50578
N
0.000
OCS_04024
Ophiocordyceps sinensis
OCS_04024
N
0.000
OIDMADRAFT_141697
Oidiodendron maius
OIDMADRAFT_141697
N
0.000
PAAG_05598
Paracoccidioides sp lutzii
PAAG_05598
N
0.000
PABG_06170
Paracoccidioides brasiliensis
PABG_06170
N
0.000
Pc13g03170
Penicillium chrysogenum
Pc13g03170
N
0.000
PCH_Pc13g03170
Penicillium rubens
PCH_Pc13g03170
N
0.000
PDE_03008
Penicillium oxalicum
PDE_03008
N
0.000
PDIP_83900
Penicillium digitatum
PDIP_83900
N
0.000
PEX1_072030
Penicillium expansum
PEX1_072030
N
0.000
PITC_046280
Penicillium italicum
PITC_046280
N
0.000
PMAA_050990
Talaromyces marneffei
PMAA_050990
N
0.000
PMAA_050990
Penicillium marneffei
PMAA_050990
N
0.000
PODANS_2_2600
Podospora anserina
PODANS_2_2600
N
0.000
PTRG_05162
Pyrenophora triticirepentis
PTRG_05162
N
0.000
PTT_11410
Pyrenophora teres
PTT_11410
N
0.000
PV04_06122
Capronia semiimmersa
PV04_06122
N
0.000
PV05_05003
Exophiala xenobiotica
PV05_05003
N
0.000
PV06_00365
Exophiala oligosperma
PV06_00365
N
0.000
PV08_04239
Exophiala spinifera
PV08_04239
N
0.000
PV09_06457
Verruconis gallopava
PV09_06457
N
0.000
PVAR5_1147
Byssochlamys spectabilis
PVAR5_1147
N
0.000
SEPMUDRAFT_147483
Sphaerulina musiva
SEPMUDRAFT_147483
N
0.000
SETTUDRAFT_150444
Setosphaeria turcica
SETTUDRAFT_150444
N
0.000
SNOG_13398
Stagonospora nodorum
SNOG_13398
N
0.000
SNOG_13398
Phaeosphaeria nodorum
SNOG_13398
N
0.000
TEQG_04364
Trichophyton equinum
TEQG_04364
N
0.000
TESG_07658
Trichophyton tonsurans
TESG_07658
N
0.000
TRV_02801
Trichophyton verrucosum
TRV_02801
N
0.000
TSTA_021880
Talaromyces stipitatus
TSTA_021880
N
0.000
U727_00430300601
Penicillium solitum
U727_00430300601
N
0.000
UREG_06714
Uncinocarpus reesii
UREG_06714
N
0.000
V499_07080
Pseudogymnoascus pannorum
V499_07080
N
0.000
VDAG_04562
Verticillium dahliae
VDAG_04562
N
0.000
VDBG_09326
Verticillium albo atrum
VDBG_09326
N
0.000
VDBG_09326
Verticillium alfalfae
VDBG_09326
N
0.000
VHEMI10091
Torrubiella hemipterigena
VHEMI10091
N
0.000
W97_02882
Coniosporium apollinis
W97_02882
N
0.000
Z519_04250
Cladophialophora bantiana
Z519_04250
N
0.000