CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ha01581
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Ha01581
T023889_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ha01581.1.p
B3
94
184
FFKIFFSDQSGQRLKIPASFHQHLKEQPTGLVSLKGPSGNTWQAVLTSDSEGLFFGQGWKEFVMDHSVKQGHFLVFTYDGLSQFSVTVFGS
Pavir.Ha01581.1.p
B3
395
490
AVQTMMESYVYVGFFMNITCEFVRESLPRTSKKMTLWDPLGKPWEVNYVYYSGRSVASFSGGWGKFALGNNLEKFDVCVFELFKEDNIRVHIYRVV
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR12G16320
Leersia perrieri
LPERR12G16320
N
ONIVA02G30390
Oryza nivara
ONIVA02G30390
N
ONIVA05G13010
Oryza nivara
ONIVA05G13010
N
ONIVA08G21440
Oryza nivara
ONIVA08G21440
N
ORGLA02G0147100
Oryza glaberrima
ORGLA02G0147100
N
ORUFI09G07100
Oryza rufipogon
ORUFI09G07100
N
OS05G0345900
Oryza sativa
OS05G0345900
N