CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ib03968
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Ib03968
T023921_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ib03968.1.p
B3
123
213
FFKVMMGDFRSRMTIPDKFAQRFRDKIRGKITLKVYNGSTCTVVVARYQNKLVLEAGWEAFISTHDIRLADLLVFRYNGNFQFEVLVFDPS
Pavir.Ib03968.1.p
B3
318
408
FFKVLIGDFRKRLVLPDKLALHFRGKIARSIKLESRSGHTFDVQVAKNSGRVVLQSGWESFVSAHGLKMLDFLVFKYDGISRMKVLIFDHS
Pavir.Ib03968.1.p
B3
534
633
VCVMKKTNVSGEHQSMRFSGEYSEAYLPFRERTLMLHCHGKSWEVMCRIRVRRGHRNFQNLCKGWKRFVRDNNLRLGDLCLFELLKTKKCTMNVHIVCEK
Pavir.Ib03968.2.p
B3
28
118
FFKVLIGDFRKRLVLPDKLALHFRGKIARSIKLESRSGHTFDVQVAKNSGRVVLQSGWESFVSAHGLKMLDFLVFKYDGISRMKVLIFDHS
Pavir.Ib03968.2.p
B3
215
268
CVIKKTNISGRSQNMRFTGEYSDAYLPFMKRTLTLHRHGKSWDVMCHLQVPSGQ
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA17842
Drosophila pseudoobscura
FBgn0077851
N
GF21386
Drosophila ananassae
FBgn0098388
N
GG17737
Drosophila erecta
FBgn0109959
N
GI15912
Drosophila mojavensis
FBgn0138661
N
GL13143
Drosophila persimilis
FBgn0150749
N
GM11582
Drosophila sechellia
FBgn0166525
N
GE17027
Drosophila yakuba
FBgn0234513
N