CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J18471
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.J18471
T023959_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J18471.1.p
B3
11
79
PAATAPATVAWRGRSWGMRFTGGRQVQRLEAGWRGFALDAGLRLGDACVLELLDAGPDRVAFRAQVLRA
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA015201
Oryza indica
BGIOSGA015201
N
0.701
LPERR04G06900
Leersia perrieri
LPERR04G06900
N
0.761
OBART04G10380
Oryza barthii
OBART04G10380
N
0.701
OGLUM04G10060
Oryza glumaepatula
OGLUM04G10060
N
0.701
ONIVA04G08240
Oryza nivara
ONIVA04G08240
N
0.701
ORGLA02G0343600
Oryza glaberrima
ORGLA02G0343600
N
0.701
ORGLA04G0074500
Oryza glaberrima
ORGLA04G0074500
N
0.701
ORUFI04G11550
Oryza rufipogon
ORUFI04G11550
N
0.701
OS04G0386900
Oryza sativa
OS04G0386900
N
0.701
Pavir.Gb01948
Panicum virgatum
Pavir.Gb01948
N
0.761
Si012575m.g
Setaria italica
Si012575m.g
N
0.716