CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK11025.1
(
Cannabis sativa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
PK11025.1
T024338_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.713
0.713
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK11025.1
B3
61
164
FDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGLADKERLFIDWRRRP
Links
Other
B3
family TFs
Other
Cannabis sativa
TFs
283 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AOL_s00004g189
Arthrobotrys oligospora
AOL_s00004g189
N
0.000
AUEXF2481DRAFT_45076
Aureobasidium subglaciale
AUEXF2481DRAFT_45076
N
0.000
AFUA_3G15290
Aspergillus fumigatus
CADAFUAG00005101
N
0.000
EURHEDRAFT_415639
Aspergillus ruber
EURHEDRAFT_415639
N
0.000
H072_3849
Dactylellina haptotyla
H072_3849
N
0.000
OIDMADRAFT_43237
Oidiodendron maius
OIDMADRAFT_43237
N
0.000
PODANS_1_4940
Podospora anserina
PODANS_1_4940
N
0.000
PV08_09945
Exophiala spinifera
PV08_09945
N
0.000
SS1G_05808
Sclerotinia sclerotiorum
SS1G_05808
N
0.000