CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0012s03740
(
Populus trichocarpa
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
POPTR_0012s03740
T024716_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0012s03740.1
BBR
1
283
MDEDNSLNIRNWGYYEPTSVKGNLGLQLLSPTMPEKPFLGARSNAIMTNVNGGFHHRDIGVSQPMFPMEYTRDVWIGHREKLLNMLPGNHNYEALLPETASTHHVQVFQPPDSENDEMLDQVEESGFIEKENGPNKKRQRANAPKSPKAKKGTRAPRVPKPEGSPVQRVRSAKKTAEIMINGINMDMSVVPIPVCSCTGNAQQCYRWGCGGWQSACCTTCISMYPLPMSTKRRGARIAGRKMSSGAFKKVLEKLADEGYDFSNPIDLRTHWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Populus trichocarpa
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL012501
Aedes aegypti
AAEL012501
N
AALB010370
Anopheles albimanus
AALB010370
N
AARA000663
Anopheles arabiensis
AARA000663
N
AATE012391
Anopheles atroparvus
AATE012391
N
ACHR006509
Anopheles christyi
ACHR006509
N
ACUA005983
Anopheles culicifacies
ACUA005983
N
ADIR002346
Anopheles dirus
ADIR002346
N
AEPI001980
Anopheles epiroticus
AEPI001980
N
AFUN002603
Anopheles funestus
AFUN002603
N
AGAP011847
Anopheles gambiae
AGAP011847
N
AMEC011551
Anopheles melas
AMEC011551
N
AMEM000663
Anopheles merus
AMEM000663
N
AMIN008552
Anopheles minimus
AMIN008552
N
AQUA009060
Anopheles quadriannulatus
AQUA009060
N
ASIS019330
Anopheles sinensis
ASIS019330
N
ASTEI05063
Anopheles stephensi
ASTEI05063
N
CPIJ001450
Culex quinquefasciatus
CPIJ001450
N
CpipJ_CPIJ001450
Culex pipiens
CpipJ_CPIJ001450
N