VIT_18s0001g13730 (Vitis vinifera)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF06217 (GAGA_bind) IPR010409 VIT_18s0001g13730 T024771_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC6
M06719_2.00 		Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTCTCTM		 Dap-seq
OMalley et al.(2016)
BPC6_col_a 		0.770 0.770
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_18s0001g13730.t01 BBR 1 337

Links

Other BBR family TFs
Other Vitis vinifera TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HES6 Bos taurus ENSBTAG00000009870 I
ENSCPOG00000023252 Cavia porcellus ENSCPOG00000023252 I
ENSCSAG00000006035 Chlorocebus sabaeus ENSCSAG00000006035 I
HES6 Homo sapiens ENSG00000144485 D
ENSMEUG00000011309 Macropus eugenii ENSMEUG00000011309 I
ENSMMUG00000031113 Macaca mulatta ENSMMUG00000031113 I
HES6 Monodelphis domestica ENSMODG00000010642 I
ENSMPUG00000000119 Mustela putorius furo ENSMPUG00000000119 I
Hes6 Mus musculus ENSMUSG00000067071 I
HES6 Ochotona princeps ENSOPRG00000014855 I
HES6 Procavia capensis ENSPCAG00000017100 I
HES6 Pteropus vampyrus ENSPVAG00000005572 I
Hes6 Rattus norvegicus ENSRNOG00000020194 I
HES6 Sus scrofa ENSSSCG00000016342 I
ENSSTOG00000025930 Ictidomys tridecemlineatus ENSSTOG00000025930 I
HES6 Tursiops truncatus ENSTTRG00000009946 I