CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
cassava37681.valid.m1
(
Manihot esculenta
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
cassava37681.valid.m1
T024796_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava37681.valid.m1
BBR
12
242
GTYSNRSHIIPEASTGTSVPHFAWFYSGNFYSPPKTSSVHSQGTQIDSEPGLPVDPIRSVAPTTEPAKKNNSGTKPAKARKQKPSVKGSNQISSKISKPKQPKKASSKKNGQNMPEAKREKRNLNVDVDRMNFDLSGVPSPFCSCTGMPRVCYKWGAGGWQSSCCTITISEYPLPMSSARPGARMAGRKMSSGAYVKLLLKLAAEGHDLSHPVDLKDHWARHGTNKFVIIK
Links
Other
BBR
family TFs
Other
Manihot esculenta
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_04931
Capronia epimyces
A1O3_04931
I
0.000
ARB_00240
Arthroderma benhamiae
ARB_00240
I
0.000
ACLA_084900
Aspergillus clavatus
CADACLAG00007495
I
0.000
CADAFLAG00000859
Aspergillus flavus
CADAFLAG00000859
I
0.000
CADAFLAG00004637
Aspergillus flavus
CADAFLAG00004637
I
0.000
CADAFLAG00004736
Aspergillus flavus
CADAFLAG00004736
I
0.000
AFUA_6G11230
Aspergillus fumigatus
CADAFUAG00002339
I
0.000
AFUA_3G13600
Aspergillus fumigatus
CADAFUAG00005567
I
0.000
CADANGAG00007073
Aspergillus niger
CADANGAG00007073
I
0.000
ANIA_00568
Aspergillus nidulans
CADANIAG00002110
D
0.000
CADAORAG00007608
Aspergillus oryzae
CADAORAG00007608
I
0.000
CADAORAG00007699
Aspergillus oryzae
CADAORAG00007699
I
0.000
ATEG_05044
Aspergillus terreus
CADATEAG00003666
I
0.000
NFIA_056930
Neosartorya fischeri
CADNFIAG00005285
I
0.000
NFIA_063760
Neosartorya fischeri
CADNFIAG00006020
I
0.000
CIMG_04445
Coccidioides immitis
CIMG_04445
I
0.000
CPC735_073100
Coccidioides posadasii
CPC735_073100
I
0.000
CSUB01_08716
Colletotrichum sublineola
CSUB01_08716
I
0.000
estExt_Genewise1.C_50767
Neurospora discreta
estExt_Genewise1.C_50767
I
0.000
EURHEDRAFT_465981
Aspergillus ruber
EURHEDRAFT_465981
I
0.000
e_gw1.36.139.1
Nectria haematococca
e_gw1.36.139.1
I
0.000
fgenesh1_pm.00042_#_363
Aspergillus carbonarius
fgenesh1_pm.00042_#_363
I
0.000
fgenesh1_pm.00659_#_1
Aspergillus carbonarius
fgenesh1_pm.00659_#_1
I
0.000
FVEG_12587
Fusarium verticillioides
FVEG_12587
N
0.000
GLRG_07904
Colletotrichum graminicola
GLRG_07904
I
0.000
H101_00939
Trichophyton interdigitale
H101_00939
I
0.000
H102_02125
Trichophyton rubrum
H102_02125
I
0.000
H105_02141
Trichophyton soudanense
H105_02141
I
0.000
HMPREF1624_07087
Sporothrix schenckii
HMPREF1624_07087
I
0.000
MCYG_05706
Arthroderma otae
MCYG_05706
I
0.000
MCYG_05706
Microsporum canis
MCYG_05706
I
0.000
MGYG_02800
Microsporum gypseum
MGYG_02800
I
0.000
NechaG51686
Fusarium solani
NechaG51686
I
0.000
PDE_07973
Penicillium oxalicum
PDE_07973
I
0.000
PMAA_012040
Penicillium marneffei
PMAA_012040
N
0.000
PMAA_012040
Talaromyces marneffei
PMAA_012040
N
0.000
PMAA_052840
Penicillium marneffei
PMAA_052840
I
0.000
PMAA_052840
Talaromyces marneffei
PMAA_052840
I
0.000
PV06_00500
Exophiala oligosperma
PV06_00500
I
0.000
PV08_01656
Exophiala spinifera
PV08_01656
I
0.000
PV11_04029
Exophiala sideris
PV11_04029
N
0.000
PVAR5_6400
Byssochlamys spectabilis
PVAR5_6400
I
0.000
SAPIO_CDS7742
Scedosporium apiospermum
SAPIO_CDS7742
N
0.000
SMAC_06700
Sordaria macrospora
SMAC_06700
I
0.000
SPBR_03934
Sporothrix brasiliensis
SPBR_03934
I
0.000
TEQG_00731
Trichophyton equinum
TEQG_00731
I
0.000
TESG_04636
Trichophyton tonsurans
TESG_04636
I
0.000
TRIATDRAFT_35738
Trichoderma atroviride
TRIATDRAFT_35738
I
0.000
TRIVIDRAFT_124610
Trichoderma virens
TRIVIDRAFT_124610
I
0.000
TRIVIDRAFT_158628
Trichoderma virens
TRIVIDRAFT_158628
N
0.000
TRV_05232
Trichophyton verrucosum
TRV_05232
I
0.000
TSTA_020100
Talaromyces stipitatus
TSTA_020100
I
0.000
TSTA_122680
Talaromyces stipitatus
TSTA_122680
I
0.000
U727_00433165191
Penicillium solitum
U727_00433165191
I
0.000
UREG_01672
Uncinocarpus reesii
UREG_01672
I
0.000
VDAG_07912
Verticillium dahliae
VDAG_07912
I
0.000
VDBG_01341
Verticillium alfalfae
VDBG_01341
I
0.000
VDBG_01341
Verticillium albo atrum
VDBG_01341
I
0.000