CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.382200
(
Cucumis sativus
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Cucsa.382200
T024802_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.382200.1
BBR
12
324
MDDGRQHENGRHKLDYFRGSSSPWNMVPPNHVKEPNALVMNKKIMSIIAERDAAIRERNLALSEKKEALAARDEALRQRDEALVQRDSALMERDNALAALEIRDNASNFPLGGGVQRKTKRLHHLSNHMPNISETSYGTKDVHITDAFPITVIASEAVKSQQGKRAKDNKLVSSKTSRPPRKKVGEDLNRHAATDGTKYRTDWDGQDVGLNLVSFDDSSMPAPICSCTGFARQCYKWGNGGWQSSCCTTHMSMYPLPHLENKRHARMGGRKMSGSVFTKLLSRLAAAGHDLSVPVDLKDHWARHGTNRYITIR
Cucsa.382200.2
BBR
1
313
MDDGRQHENGRHKLDYFRGSSSPWNMVPPNHVKEPNALVMNKKIMSIIAERDAAIRERNLALSEKKEALAARDEALRQRDEALVQRDSALMERDNALAALEIRDNASNFPLGGGVQRKTKRLHHLSNHMPNISETSYGTKDVHITDAFPITVIASEAVKSQQGKRAKDNKLVSSKTSRPPRKKVGEDLNRHAATDGTKYRTDWDGQDVGLNLVSFDDSSMPAPICSCTGFARQCYKWGNGGWQSSCCTTHMSMYPLPHLENKRHARMGGRKMSGSVFTKLLSRLAAAGHDLSVPVDLKDHWARHGTNRYITIR
Cucsa.382200.3
BBR
1
313
MDDGRQHENGRHKLDYFRGSSSPWNMVPPNHVKEPNALVMNKKIMSIIAERDAAIRERNLALSEKKEALAARDEALRQRDEALVQRDSALMERDNALAALEIRDNASNFPLGGGVQRKTKRLHHLSNHMPNISETSYGTKDVHITDAFPITVIASEAVKSQQGKRAKDNKLVSSKTSRPPRKKVGEDLNRHAATDGTKYRTDWDGQDVGLNLVSFDDSSMPAPICSCTGFARQCYKWGNGGWQSSCCTTHMSMYPLPHLENKRHARMGGRKMSGSVFTKLLSRLAAAGHDLSVPVDLKDHWARHGTNRYITIR
Cucsa.382200.4
BBR
1
313
MDDGRQHENGRHKLDYFRGSSSPWNMVPPNHVKEPNALVMNKKIMSIIAERDAAIRERNLALSEKKEALAARDEALRQRDEALVQRDSALMERDNALAALEIRDNASNFPLGGGVQRKTKRLHHLSNHMPNISETSYGTKDVHITDAFPITVIASEAVKSQQGKRAKDNKLVSSKTSRPPRKKVGEDLNRHAATDGTKYRTDWDGQDVGLNLVSFDDSSMPAPICSCTGFARQCYKWGNGGWQSSCCTTHMSMYPLPHLENKRHARMGGRKMSGSVFTKLLSRLAAAGHDLSVPVDLKDHWARHGTNRYITIR
Cucsa.382200.5
BBR
1
313
MDDGRQHENGRHKLDYFRGSSSPWNMVPPNHVKEPNALVMNKKIMSIIAERDAAIRERNLALSEKKEALAARDEALRQRDEALVQRDSALMERDNALAALEIRDNASNFPLGGGVQRKTKRLHHLSNHMPNISETSYGTKDVHITDAFPITVIASEAVKSQQGKRAKDNKLVSSKTSRPPRKKVGEDLNRHAATDGTKYRTDWDGQDVGLNLVSFDDSSMPAPICSCTGFARQCYKWGNGGWQSSCCTTHMSMYPLPHLENKRHARMGGRKMSGSVFTKLLSRLAAAGHDLSVPVDLKDHWARHGTNRYITIR
Cucsa.382200.6
BBR
1
313
MDDGRQHENGRHKLDYFRGSSSPWNMVPPNHVKEPNALVMNKKIMSIIAERDAAIRERNLALSEKKEALAARDEALRQRDEALVQRDSALMERDNALAALEIRDNASNFPLGGGVQRKTKRLHHLSNHMPNISETSYGTKDVHITDAFPITVIASEAVKSQQGKRAKDNKLVSSKTSRPPRKKVGEDLNRHAATDGTKYRTDWDGQDVGLNLVSFDDSSMPAPICSCTGFARQCYKWGNGGWQSSCCTTHMSMYPLPHLENKRHARMGGRKMSGSVFTKLLSRLAAAGHDLSVPVDLKDHWARHGTNRYITIR
Links
Other
BBR
family TFs
Other
Cucumis sativus
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF613
Callithrix jacchus
ENSCJAG00000002071
I
0.000
ENSCSAG00000002006
Chlorocebus sabaeus
ENSCSAG00000002006
I
0.000
ZNF613
Homo sapiens
ENSG00000176024
D
0.000
ZNF613
Gorilla gorilla
ENSGGOG00000004234
I
0.000
ZNF613
Macaca mulatta
ENSMMUG00000023136
I
0.000
ENSNLEG00000005975
Nomascus leucogenys
ENSNLEG00000005975
I
0.000
ZNF613
Otolemur garnettii
ENSOGAG00000013260
N
0.000
ENSPPYG00000010329
Pongo abelii
ENSPPYG00000010329
I
0.000
ZNF613
Pan troglodytes
ENSPTRG00000022586
I
0.000