CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10018977m.g
(
Eutrema salsugineum
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF06217 (GAGA_bind)
IPR010409
Thhalv10018977m.g
T024905_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10018977m
BBR
1
281
MMDEDGLSNRNWGYYEPSQFRPNLGFQLIPSIIDRNEKPFLCPQNPNLITPNNGYRGGSSSSNVMSFPRDYTVSDAPFMSYSWLNQHRDSKFFSNSPNNPSNHHTFLVPDTSRTQPMQLLQIPKPEFSEVDESLKRRHFSGGERAGPKAKKERKLKDSNVPRMQRERSPLRKSIEMVVNGVSMDIGCLPVPVCSCTGMAQPCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLSADGFDFSSPIDLKSHWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Eutrema salsugineum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_02746
Schistosoma haematobium
A_02746
I
0.000
BGIBMGA012033
Bombyx mori
BGIBMGA012033
I
0.000
csin111822
Clonorchis sinensis
csin111822
I
0.000
D915_08809
Fasciola hepatica
D915_08809
I
0.000
ECANG7_04949
Echinococcus canadensis
ECANG7_04949
I
0.000
EmuJ_000624300
Echinococcus multilocularis
EmuJ_000624300
I
0.000
ENSAMXG00000000487
Astyanax mexicanus
ENSAMXG00000000487
I
0.000
ENSAMXG00000004351
Astyanax mexicanus
ENSAMXG00000004351
I
0.000
GB42177
Apis mellifera
GB42177
I
0.000
HDID_0000251001
Hymenolepis diminuta
HDID_0000251001
N
0.000
HmN_000549900
Hymenolepis microstoma
HmN_000549900
N
0.000
Hsal_01862--XP_001122645.1_APIME
Harpegnathos saltator
Hsal_01862--XP_001122645.1_APIME
I
0.000
ISCW019706
Ixodes scapularis
ISCW019706
I
0.000
KGM_20305
Danaus plexippus
KGM_20305
I
0.000
MCOS_0000023201
Mesocestoides corti
MCOS_0000023201
I
0.000
PXEA_0003305101
Protopolystoma xenopodis
PXEA_0003305101
N
0.000
Sakowv30031408m.g
Saccoglossus kowalevskii
Sakowv30031408m.g
I
0.000
SCUD_0001558401
Schistosoma curassoni
SCUD_0001558401
I
0.000
Sjc_0073180
Schistosoma japonicum
Sjc_0073180
I
0.000
SMAR006929
Strigamia maritima
SMAR006929
I
0.000
Smp_022610
Schistosoma mansoni
Smp_022610
I
0.000
SMRZ_0001749101
Schistosoma margrebowiei
SMRZ_0001749101
I
0.000
SMTD_0000660301
Schistosoma mattheei
SMTD_0000660301
I
0.000
SMU15030484
Schmidtea mediterranea
SMU15030484
N
0.000
SPER_0001684001
Spirometra erinaceieuropaei
SPER_0001684001
N
0.000
SSLN_0000384801
Schistocephalus solidus
SSLN_0000384801
N
0.000
T265_00953
Opisthorchis viverrini
T265_00953
I
0.000
TASK_0000025401
Taenia asiatica
TASK_0000025401
I
0.000
TRE_0000636201
Trichobilharzia regenti
TRE_0000636201
I
0.000
TsM_000945000
Taenia solium
TsM_000945000
I
0.000