CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh-pag1_scaffold_236-abinit-gene-0.77
(
Pythium aphanidermatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
fgenesh-pag1_scaffold_236-abinit-gene-0.77
T026477_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPA00000019018
BED ZF
23
71
SVVWETFTPMNSSGIANGMIDSAKCTVCNKVFSTRHGTSSMMRHAKRHS
Links
Other
BED ZF
family TFs
Other
Pythium aphanidermatum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_17979
Phytophthora parasitica
F443_17979
N
maker-pir_contig_224-snap-gene-0.18
Pythium irregulare
maker-pir_contig_224-snap-gene-0.18
N
maker-piw_contig_232-snap-gene-0.16
Pythium iwayamai
maker-piw_contig_232-snap-gene-0.16
N
maker-pve_contig_1243-snap-gene-0.4
Pythium vexans
maker-pve_contig_1243-snap-gene-0.4
N
SPRG_01513
Saprolegnia parasitica
SPRG_01513
N