CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra83594
(
Phytophthora ramorum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Phyra83594
T027289_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra83594
BED ZF
77
122
SFIWDYFVKDASGKFVICTLCPSQTTRFAYSGGTSTMNRHLRKKHH
Links
Other
BED ZF
family TFs
Other
Phytophthora ramorum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_17222
Ancylostoma duodenale
ANCDUO_17222
N
CGOC_0001347601
Cylicostephanus goldi
CGOC_0001347601
N
GPLIN_000554300
Globodera pallida
GPLIN_000554300
N
maker-nMf.1.1.scaf00641-snap-gene-0.11
Meloidogyne floridensis
maker-nMf.1.1.scaf00641-snap-gene-0.11
N
NECAME_00548
Necator americanus
NECAME_00548
N
snap_masked-nMf.1.1.scaf31837-processed-gene-0.1
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf31837-processed-gene-0.1
N
SROB_0000835501
Schistosoma rodhaini
SROB_0000835501
N
TTAC_0000382701
Hydatigera taeniaeformis
TTAC_0000382701
N