CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0011s10500
(
Populus trichocarpa
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
POPTR_0011s10500
T027366_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0011s10500.1
BED ZF
17
65
SVVWNHFQRIRKADVCYAVCVHCDKKLSGSSNSGTTHLRNHLMRCLKRS
Links
Other
BED ZF
family TFs
Other
Populus trichocarpa
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000010458
Ailuropoda melanoleuca
ENSAMEG00000010458
I
0.000
GLI4
Canis familiaris
ENSCAFG00000029287
I
0.000
ENSCSAG00000009125
Chlorocebus sabaeus
ENSCSAG00000009125
I
0.000
GLI4
Homo sapiens
ENSG00000250571
D
0.000
GLI4
Monodelphis domestica
ENSMODG00000011659
I
0.000
ENSMPUG00000008492
Mustela putorius furo
ENSMPUG00000008492
I
0.000
GLI4
Procavia capensis
ENSPCAG00000018803
I
0.000
ENSPPYG00000018931
Pongo abelii
ENSPPYG00000018931
I
0.000
GLI4
Pan troglodytes
ENSPTRG00000020650
I
0.000
GLI4
Pteropus vampyrus
ENSPVAG00000024242
I
0.000
ENSSSCG00000006960
Sus scrofa
ENSSSCG00000006960
I
0.000
ENSSTOG00000023930
Ictidomys tridecemlineatus
ENSSTOG00000023930
I
0.000
GLI4
Tursiops truncatus
ENSTTRG00000021363
I
0.000