Cagra.0690s0016 (Capsella grandiflora)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Cagra.0690s0016 T028205_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0690s0016.1.p BED ZF 48 79
Cagra.0690s0016.1.p BED ZF 111 143

Links

Other BED ZF family TFs
Other Capsella grandiflora TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh1_kg.C_12150001 Phytophthora capsici estExt_fgenesh1_kg.C_12150001 N
F443_10240 Phytophthora parasitica F443_10240 N
fgenesh_scip_prom.28083.11401 Phytophthora lateralis fgenesh_scip_prom.28083.11401 N
fgenesh_scip_prom.46568.10241 Phytophthora kernoviae fgenesh_scip_prom.46568.10241 N
maker-pag1_scaffold_15-snap-gene-0.94 Pythium aphanidermatum maker-pag1_scaffold_15-snap-gene-0.94 N
maker-par_contig_2670-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_2670-fgenesh-gene-0.0 N
maker-pir_contig_20-fgenesh-gene-0.1 Pythium irregulare maker-pir_contig_20-fgenesh-gene-0.1 N
maker-piw_contig_52-fgenesh-gene-0.18 Pythium iwayamai maker-piw_contig_52-fgenesh-gene-0.18 N
maker-pve_contig_1641-snap-gene-0.1 Pythium vexans maker-pve_contig_1641-snap-gene-0.1 N
Phyra72995 Phytophthora ramorum Phyra72995 N
Phyra75840 Phytophthora ramorum Phyra75840 N
Phyra80034 Phytophthora ramorum Phyra80034 N
Physo141453 Phytophthora sojae Physo141453 N
PITG_09534 Phytophthora infestans PITG_09534 N
PYU1_G013112 Pythium ultimum PYU1_G013112 N