CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10015344m.g
(
Capsella rubella
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Carubv10015344m.g
T028224_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10015344m
BED ZF
45
76
LPLRKHFCVICKKQFSSGKAYGGHVRIHSTEY
Carubv10015344m
BED ZF
109
140
IAADMEGKIRCCLCGKEFQTMHSLFGHMRRHP
Links
Other
BED ZF
family TFs
Other
Capsella rubella
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLRG_06375
Colletotrichum graminicola
GLRG_06375
N