CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.004G271300
(
Gossypium raimondii
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Gorai.004G271300
T028334_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.004G271300.1
BED ZF
17
65
SVVWNHFERVRKADLCYAVCVHCNKKLSGSSNSGTTHLRNHLMRCLKRF
Gorai.004G271300.2
BED ZF
17
65
SVVWNHFERVRKADLCYAVCVHCNKKLSGSSNSGTTHLRNHLMRCLKRF
Links
Other
BED ZF
family TFs
Other
Gossypium raimondii
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP16799
Atta cephalotes
ACEP16799
N
0.000
GB41522
Apis mellifera
GB41522
N
0.000
Hsal_02319--XP_392422.2_APIME
Harpegnathos saltator
Hsal_02319--XP_392422.2_APIME
N
0.000
NV13224
Nasonia vitripennis
NV13224
N
0.000
SINV16323
Solenopsis invicta
SINV16323
N
0.000