CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J30108
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.J30108
T028626_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J30108.1.p
BED ZF
8
52
IVWEHGENFYPGWRCKYCNTQKAGGGATRLKQHLAHRGAEVVHCR
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PV05_01466
Exophiala xenobiotica
PV05_01466
N
PV06_04220
Exophiala oligosperma
PV06_04220
N
PV07_07740
Cladophialophora immunda
PV07_07740
N
PV10_00545
Exophiala mesophila
PV10_00545
N
Z519_10182
Cladophialophora bantiana
Z519_10182
N