CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15006505
(
Schmidtea mediterranea
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
SMU15006505
T028827_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15006505
BED ZF
61
99
TSTGNSDAPNAMCVLCHKILANSSLAPAKLRRHLETMHT
Links
Other
BED ZF
family TFs
Other
Schmidtea mediterranea
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA004375
Oryza indica
BGIOSGA004375
N
LPERR01G25240
Leersia perrieri
LPERR01G25240
N
OB01G38320
Oryza brachyantha
OB01G38320
N
OBART01G29370
Oryza barthii
OBART01G29370
N
OGLUM01G33420
Oryza glumaepatula
OGLUM01G33420
N
OLONG_011604
Oryza longistaminata
OLONG_011604
N
OMERI01G27190
Oryza meridionalis
OMERI01G27190
N
ONIVA01G33600
Oryza nivara
ONIVA01G33600
N
OPUNC01G29200
Oryza punctata
OPUNC01G29200
N
ORGLA01G0241600
Oryza glaberrima
ORGLA01G0241600
N
ORUFI01G32450
Oryza rufipogon
ORUFI01G32450
N
OS01G0723700
Oryza sativa
OS01G0723700
N